New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1677768 =229 (1.040)2 (0.010) 2/186 37.3 0.01 coding (1258/1311 nt) RCAP_rcc01550 M23 family peptidase
?NC_014034 2085112 = 273 (1.150)coding (1118/2316 nt) hsdR3 type I restriction‑modification system RcaSBIV subunit R
Rejected: Position hash score below cutoff.

CCGCGTGAAGGTCGGGCAAAAGGTGTCGCGCGGGGAGATAATTGGTGATACAGGCAATACCGGACGGTCCACGGGACCGCATCTGCACTATGAAATCCGGGTCGGTG....................................................................................................  <  NC_014034/1677874‑1677768
....................................................................................................GTCGGTGCCATCCCAGACATATTCGTCCAGCGTGCTTGCCATCTGGCGCACCTTGAACGGCGTCAGGAAGCCGTCCTCGATCCCCTCCCGCAGCGAGTAGACGAAAA  >  NC_014034/2085112‑2085211
                                                                                                                                                                                                               
                                                  CAGGCAATACCGGACGGTCCACGGGACCGCATCTGCACTATGAAATCCGGGTCGGTGCCATCCCAGACATATTCGTCCAGCGTGCTTGCCATCTGGCGCAC                                                          >  2:4465671/1‑101 (MQ=255)
                                                                       CGGGACCGCATCTGCACTATGAAATCCGGGTCGGTGCCATCCCAGACATATTCGTCCAGCGTGCTTGCCATCTGGCGCACCTTGAACGGCGTCAGGAAGCC                                     <  1:4465966/101‑1 (MQ=255)
                                                                                                                                                                                                               
CCGCGTGAAGGTCGGGCAAAAGGTGTCGCGCGGGGAGATAATTGGTGATACAGGCAATACCGGACGGTCCACGGGACCGCATCTGCACTATGAAATCCGGGTCGGTG....................................................................................................  <  NC_014034/1677874‑1677768
....................................................................................................GTCGGTGCCATCCCAGACATATTCGTCCAGCGTGCTTGCCATCTGGCGCACCTTGAACGGCGTCAGGAAGCCGTCCTCGATCCCCTCCCGCAGCGAGTAGACGAAAA  >  NC_014034/2085112‑2085211

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG