New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1723333 =	197 (0.830)	28 (0.120)	4/200	36.4	0.12	intergenic (‑588/+840)	infC/fpr	translation initiation factor IF/ferredoxin‑‑NADP reductase
	?	NC_014034	= 1723929	211 (0.890)					intergenic (‑1184/+244)	infC/fpr	translation initiation factor IF/ferredoxin‑‑NADP reductase
Rejected: Position hash score below cutoff.

CTTCAGCGGCCGGGGCTTCGACAGCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGG....................................................................................................  <  NC_014034/1723393‑1723333 .............................................................AGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCT  <  NC_014034/1723929‑1723830                                                                                                                                                                   CTTCAGCGGCCGGGGCTTCGACAGCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCA                                                              <  2:4471162/101‑1 (MQ=34)               GCTTCGGCAGGCGGAGCCGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTC                                                <  2:2673667/101‑1 (MQ=0)                CTTCGACAGCCGGAGCGGCTTCGGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCG                                               <  2:3620501/101‑1 (MQ=17)                 TTCGACAGCCGGGGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGCCAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGA                                              <  1:3364110/101‑1 (MQ=0)                 TTCGACAGCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGA                                              >  2:1878981/1‑101 (MQ=33)                  gCGACAGCCGGGGCGGCTTCCGCAGCCGGGGCTGCAGCGGCCGGAGCCTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGAC                                             <  2:2428163/100‑1 (MQ=0)                  TCGACGGCCGGAGCGGCTCCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGAC                                             <  1:1797485/101‑1 (MQ=12)                  TCGACAGCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGAC                                             <  1:3903740/101‑1 (MQ=32)                  TCGACAGCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGAC                                             <  1:1591869/101‑1 (MQ=32)                   cgcCAGCCGGAGCGGCTACCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGGGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACA                                            <  2:2816504/98‑1 (MQ=255)                   CGACAGCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACA                                            <  1:477785/101‑1 (MQ=32)                   CGACAGCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACA                                            <  2:3444207/101‑1 (MQ=32)                    GACAGCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAG                                           <  1:4473648/101‑1 (MQ=32)                    GACAGCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAG                                           >  1:1315175/1‑101 (MQ=32)                     ACAGCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGC                                          <  2:3909091/101‑1 (MQ=32)                     ACAGCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGC                                          >  2:4559590/1‑101 (MQ=32)                       AGCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGGGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCG                                        >  2:834314/1‑101 (MQ=17)                       AGCCGCAGCTGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCG                                        <  1:2821639/101‑1 (MQ=0)                        GCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGG                                       <  2:2168328/101‑1 (MQ=32)                        GCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGG                                       <  1:225232/101‑1 (MQ=32)                        GCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGG                                       >  1:2136674/1‑101 (MQ=32)                        GCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGG                                       >  1:1151946/1‑101 (MQ=32)                            GAGCGGCTTCCGCAGGCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGGGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCA                                   <  2:2297327/101‑1 (MQ=16)                              GCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGGGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGC                                 <  1:761350/101‑1 (MQ=25)                                     CCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCA                          >  2:3563555/1‑101 (MQ=38)                                          GCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGCGCAGCTTTCGCAGCCGG                     >  2:1700405/1‑101 (MQ=19)                                             GGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTTCGCGGCCGGGGg                  >  2:3712632/1‑100 (MQ=255)                                                 CTTCAGCGGCCGGAGCTTCGACAGCCGGAGCCGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCA              <  1:3219759/101‑1 (MQ=14)                                                             GAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCc  >  2:117689/1‑100 (MQ=1)                                                                                                                                                                   CTTCAGCGGCCGGGGCTTCGACAGCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGG....................................................................................................  <  NC_014034/1723393‑1723333 .............................................................AGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCTTCGACAGCCGGAGCAGCTTCCGCAGCCGGGGCTTCAGCGGCCGGAGCT  <  NC_014034/1723929‑1723830 Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 41 ≤  ATCG