New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1723333 =191 (0.830)2 (0.010) 2/194 38.2 0.01 intergenic (‑588/+840) infC/fpr translation initiation factor IF/ferredoxin‑‑NADP reductase
?NC_014034 3369981 = 248 (1.040)coding (601/2580 nt) RCAP_rcc03170 hypothetical protein
Rejected: Position hash score below cutoff.

GCAGCTTCCGCAGCCGGGGCAGCTTCCGCAGCCGGGGCAGCTTCAGCGGCCGGGGCTTCGACAGCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGG....................................................................................................  <  NC_014034/1723433‑1723333
..................................................................................................CGGCCCAGCCTTCCCAGGCGGGGCCCATCGCGGCCTCGGCGGCGCCGGGGGGCCGGGGATGTTCGGGCGGAGAAAAGATCGCCAGGGGCGCGCCGAAGATCAG  >  NC_014034/3369981‑3370080
                                                                                                                                                                                                         
                                                  CGGGGCTTCGACAGCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGGCCCAGCCTTCCCAGGCGGGGCCCATCGCGGCCTCGGCGGCGCCGGGGGGC                                                    >  1:414794/1‑101 (MQ=32)
                                                           GACAGCCGCAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGGCCCAGCCTTCCCAGGCGGGGCCCATCGCGGCCTCGGCGGCGCCGGGGGGCCGGGGATGT                                           <  2:414757/101‑1 (MQ=1)
                                                                                                                                                                                                         
GCAGCTTCCGCAGCCGGGGCAGCTTCCGCAGCCGGGGCAGCTTCAGCGGCCGGGGCTTCGACAGCCGGAGCGGCTTCCGCAGCCGGGGCTTCAGCGGCCGG....................................................................................................  <  NC_014034/1723433‑1723333
..................................................................................................CGGCCCAGCCTTCCCAGGCGGGGCCCATCGCGGCCTCGGCGGCGCCGGGGGGCCGGGGATGTTCGGGCGGAGAAAAGATCGCCAGGGGCGCGCCGAAGATCAG  >  NC_014034/3369981‑3370080

Base quality scores:  ATCG  < 3 ≤  ATCG  < 10 ≤  ATCG  < 19 ≤  ATCG  < 27 ≤  ATCG  < 38 ≤  ATCG