New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1732866	25 (0.110)	16 (0.070)	4/194	35.8	0.39	intergenic (‑290/‑113)	RCAP_rcc01601/tgt	FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase
	?	NC_014034	1732867 =	25 (0.110)					intergenic (‑291/‑112)	RCAP_rcc01601/tgt	FeS assembly SUF system protein/queuine tRNA‑ribosyltransferase
Rejected: Position hash score below cutoff.

GCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAGCCCCCC.......................................................................................................  >  NC_014034/1732785‑1732866 ......................................................................................GTCCGCCTCGGGCTTGCCCGAGGCGAAAGCTTCCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGGCGCTGCTAAACGCGCGCC  >  NC_014034/1732867‑1732965                                                                                    |||                                                                                                    GCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAGCCCCCCGCGGGT.CGCCTCGGGCTTG                                                                                     <  2:2697891/101‑1 (MQ=32)           GCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAGCCCCCCGCGGGT.CGCCTCGGGCTTGCCCGAGGCGA                                                                           <  1:3828337/101‑1 (MQ=32)             AAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAGCCCCCCGCGGGT.CGCCTCGGGCTTGCCCGAGGCGAAA                                                                         <  2:625536/101‑1 (MQ=33)                            CCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAGCCCCCCGCGGGT.CGCCTCGGGCTTGCCCGAGGCGAAAGCTTCCCCCCGTGAA                                                          <  2:3038981/101‑1 (MQ=255)                              TAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAGCCCCCCGCGGGT.CGCCTCGGGCTTGCCCGAGGCGAAAGCTTCCCCCCGTGAAAA                                                        <  1:4631361/101‑1 (MQ=255)                                GGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAGCCCCCCGCGGGT.CGCCTCGGGCTTGCCCGAGGCGAAAGCTTCCCCCCGTGAAAACC                                                      <  1:2228877/101‑1 (MQ=255)                                            CCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAGCCCCCCGCGGGT.CGCCTCGGGCTTGCCCGAGGCGAAAGCTTCCCCCCGTGAAAACCTTGCCTGCGCGC                                          <  2:2866880/101‑1 (MQ=255)                                                                   GGGGGTGAAGCCCCCCGCGGGT.CGCCTCGGGCTTGCCCGAGGCGAAAGCTTCCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGGC                   >  2:2282214/1‑101 (MQ=17)                                                                   GGGGGTGAAGCCCCCCGCGGGT.CGCCTCGGGCTTGCCCGAGGCGAAAGCTTCCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGGC                   >  2:1473257/1‑101 (MQ=17)                                                                      GGTGAAGCCCCCCGCGGGT.CGCCTCGGGCTTGCCCGAGGCGAAAGCTTCCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGGCGCT                <  2:3806115/101‑1 (MQ=14)                                                                       GTGAAGCCCCCCGCGGGT.CGCCTCGGGCTTGCCCGAGGCGAAAGCTTCCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGGCGCTG               <  1:1697777/101‑1 (MQ=14)                                                                        TGAAGCCCCCCGCGGGT.CGCCTCGGGCTTGCCCGAGGCGAAAGCTTCCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGGCGCTGC              >  2:1276947/1‑101 (MQ=14)                                                                          agcCCCCCG.CGGGT.CGCCTCGGGCTTGCCCGAGGCGAAAGCTTCCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGGCGCTGCTAA           <  2:1319985/98‑1 (MQ=1)                                                                          AAGCCCCCCGCGGGT.CGCCTCGGGCTTGCCCGAGGCGAAAGCTTCCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGGCGCTGCTA            >  1:1487046/1‑101 (MQ=11)                                                                           gcCCCCCG.CGGGT.CGCCTCGGGCTTGCCCGAGGCGAAAGCTTCCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGGCGCTGCTAAA          >  2:2808326/3‑101 (MQ=1)                                                                             CCCCCG.CGGGT.CGCCTCGGGCTTGCCCGAGGCGAAAGCTTCCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGGCGCTGCTAAACG        <  1:2350940/101‑1 (MQ=1)                                                                                   gCGGGT.CGCCTCGGGCTTGCCCGAGGCGAAAGCTTCCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGGCGCTGCTAAACGCGCGC   <  1:4432990/100‑1 (MQ=1)                                                                                   gCGGGT.CGCCTCGGGCTTGCCCGAGGCGAAAGCTTCCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGGCGCTGCTAAACGCGCGC   <  2:551788/100‑1 (MQ=1)                                                                                    CGGGT.CGCCTCGGGCTTGCCCGAGGCGAAAGCTTCCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGGCGCTGCTAAACGCGCGCC  >  1:781341/1‑101 (MQ=1)                                                                                    CGGGT.CGCCTCGGGCTTGCCCGAGGCGAAAGCTTCCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGGCGCTGCTAAACGCGCGCC  >  1:4279851/1‑101 (MQ=1)                                                                                    |||                                                                                                    GCGTCAACAGGCAAGGGCCCCGCTTTTCCTAGGCAAAATACGCCCTTCTTTCTTTTCGGGGGGGCGGGGGGTGAAGCCCCCC.......................................................................................................  >  NC_014034/1732785‑1732866 ......................................................................................GTCCGCCTCGGGCTTGCCCGAGGCGAAAGCTTCCCCCCGTGAAAACCTTGCCTGCGCGCGTCGCTTTCCCTTTCGGCCCGGCGCTGCTAAACGCGCGCC  >  NC_014034/1732867‑1732965 Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 23 ≤  ATCG  < 32 ≤  ATCG  < 39 ≤  ATCG