New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 175640214 (0.980)2 (0.010) 2/184 37.1 0.01 coding (165/774 nt) RCAP_rcc00154 peptide ABC transporter permease
?NC_014034 2058892 = 206 (0.870)coding (757/927 nt) RCAP_rcc01901 polyphosphate kinase 2 domain‑containing protein
Rejected: Position hash score below cutoff.

TCGGGCCGCTGCTCGATCCGGTGGGGCCGTTCAAACAGGCGCTGCTGCGGGTGCTGGCCGGGCCGGATGCGCAGGCCTGGTTCGGCTATGATCATCTGGGCCGGTCG....................................................................................................  >  NC_014034/175534‑175640
...................................................................................................GCCGGTCGGACACGGCGGCGGCGCCCTGGACGGTGATCCGCGCCGATGACAAATACCGGGCCCGCATCGCCGCGATCCAGACCGTTCTGGGCGCGCTCGACTACCCGG  >  NC_014034/2058892‑2058991
                                                                                                                                                                                                               
                                                          CGGGCCGGATGCGCAGGCCTGGTTCGGCTATGATCATCTGGGCCGGTCGGACACGGCGGCGGCGCCCTGGGCGGTGGTCCGCGCCGATGACAAATACCGGc                                                  >  2:3747335/1‑100 (MQ=255)
                                                                  ATGCGCAGGCCTGGTTCGGCTATGATCATCTGGGCCGGTCGGACACGGCGGCGGCGCCCTGGACGGTGATCCGCGCCGATGACAAATACCGGGCCCGCATC                                          <  1:3747610/101‑1 (MQ=255)
                                                                                                                                                                                                               
TCGGGCCGCTGCTCGATCCGGTGGGGCCGTTCAAACAGGCGCTGCTGCGGGTGCTGGCCGGGCCGGATGCGCAGGCCTGGTTCGGCTATGATCATCTGGGCCGGTCG....................................................................................................  >  NC_014034/175534‑175640
...................................................................................................GCCGGTCGGACACGGCGGCGGCGCCCTGGACGGTGATCCGCGCCGATGACAAATACCGGGCCCGCATCGCCGCGATCCAGACCGTTCTGGGCGCGCTCGACTACCCGG  >  NC_014034/2058892‑2058991

Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 23 ≤  ATCG  < 30 ≤  ATCG  < 38 ≤  ATCG