New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 179919	249 (1.060)	2 (0.010)	2/192	38.0	0.01	coding (362/981 nt)	RCAP_rcc00157	hypothetical protein
	?	NC_014034	3334071 =	218 (0.920)					coding (452/774 nt)	paaG	enoyl‑CoA hydratase
Rejected: Position hash score below cutoff.

GTGGCTGTCGGTCTTGAAGAAGAACTTGTCCGATCCTTCGGCCTCGCCGCCGCCGGGCTCGACCCGGGCGGCAAAGTTGCCGCGCGTGCCGCGCAGGTCGG....................................................................................................  >  NC_014034/179819‑179919 ....................................................................................................GGCATGGCCCGCGCCATGGGGATGGCCCTGTTCGCCGAGAAGATCGGCGCCGAAGAGGCCGCGCGCATGGGGCTGATCTGGGAAGCCGTGCCCGATGTCGA  >  NC_014034/3334071‑3334170                                                                                                                                                                                                            TGGCTGTCGGTCTTGAAGAAGAACTTGTCCGATCCTTCGGCCTCGCCGCCGCCGGGCTCGACCCGGGCGGCAAAGTTGCCGCGCGTGCCGCGCAGGTCGGG                                                                                                     <  1:2245725/101‑1 (MQ=255)  TGGCTGTCGGTCTTGAAGAAGAACTTGTCCGATCCTTCGGCCTCGCCGCCGCCGGGCTCGACCCGGGCGGCAAAGTTGCCGCGCGTGCCGCGCAGGTCGGG                                                                                                     >  1:2617243/1‑101 (MQ=255)  TGGCTGTCGGTCTTGAAGAAGAACTTGTCCGATCCTTCGGCCTCGCCGCCGCCGGGCTCGACCCGGGCGGCAAAGTTGCCGCGCGTGCCGCGCAGGTCGGG                                                                                                     >  2:855633/1‑101 (MQ=255)   GGCTGTCGGTCTTGAAGAAGAACTTGTCCGATCCTTCGGCCTCGCCGCCGCCGGGCTCGACCCGGGCGGCAAAGTTGCCGCGCGTGCCGCGCAGGTCGGGC                                                                                                    <  1:729193/101‑1 (MQ=255)    GCTGTCGGTCTTGAAGAAGAACTTGTCCGATCCTTCGGCCTCGCCGCCGCCGGGCTCGACCCGGGCGGCAAAGTTGCCGCGCGTGCCGCGCAGGTCGGGCA                                                                                                   <  1:2138748/101‑1 (MQ=255)    GCTGTCGGTCTTGAAGAAGAACTTGTCCGATCCTTCGGCCTCGCCGCCGCCGGGCTCGACCCGGGCGGCAAAGTTGCCGCGCGTGCCGCGCAGGTCGGGCA                                                                                                   <  1:2219422/101‑1 (MQ=255)                                 ATCCTTCGGCCTCGCCGCCGCCGGGCTCGACCCGGGCGGCAAAGTTGCCGCGCGTGCCGCGCAGGTC.GGCATGGCCCGCGCCATGGGGATGGCCCTGTTCG                                                                     >  2:1924198/1‑101 (MQ=255)                                    CTTCGGCCTCGCCGCCGCCGGGCTCGACCCGGGCGGCAAAGTTGCCGCGCGTGCCGCGCAGGTC.GGCATGGCCCGCGCCATGGGGATGGCCCTGTTCGCCG                                                                  <  1:1924333/101‑1 (MQ=255)                                                                                                                                                                                                           GTGGCTGTCGGTCTTGAAGAAGAACTTGTCCGATCCTTCGGCCTCGCCGCCGCCGGGCTCGACCCGGGCGGCAAAGTTGCCGCGCGTGCCGCGCAGGTCGG....................................................................................................  >  NC_014034/179819‑179919 ....................................................................................................GGCATGGCCCGCGCCATGGGGATGGCCCTGTTCGCCGAGAAGATCGGCGCCGAAGAGGCCGCGCGCATGGGGCTGATCTGGGAAGCCGTGCCCGATGTCGA  >  NC_014034/3334071‑3334170 Base quality scores:  ATCG  < 3 ≤  ATCG  < 19 ≤  ATCG  < 25 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG