New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1830922221 (1.020)2 (0.010) 2/182 36.9 0.01 coding (2062/3915 nt) RCAP_rcc01698 hypothetical protein
?NC_014034 = 3403206 223 (0.940)coding (618/1566 nt) glpD glycerol‑3‑phosphate dehydrogenase
Rejected: Position hash score below cutoff.

ACCGAGATGGGCTGCGCGGCGATCGACAAGGGCACGAACCAGCCCAACAAGTTCCTCGATCCGAAAAGCTCGGAATCGGGCCTGCCGCATCATTCCGACGGGCGGCGCG....................................................................................................  >  NC_014034/1830814‑1830922
....................................................................................................GGCGGCGCGGCAGGGTGATCTGTGGCGCATCGAGACCGAGGGGCCCGCGGGCAAGGCCGTGCATCTGGCCCGCGGTCTGGTCAATGCCGCCGGGCCCTGGGTCGGGCAG  <  NC_014034/3403206‑3403107
                                                                                                                                                                                                                 
                                    AACCAGCCCAACAAGTTCCTCGATCCGAAAAGCTCGGAATCGGGCCTGCCGCATCATTCCGACGGGCGGCGCGGCAGGGTGATCTGTGGCGCATCGAGACC                                                                          >  1:700961/1‑101 (MQ=255)
                                                                     TCGGAATCGGGCCTGCCGCATCATTCCGACGGGCGGCGCGGCAGGGTGATCTGTGGCGCATCGAGACCGAGGGGCCCGCGGGCAAGGCCGTGCATCTGGCC                                         <  2:700886/101‑1 (MQ=255)
                                                                                                                                                                                                                 
ACCGAGATGGGCTGCGCGGCGATCGACAAGGGCACGAACCAGCCCAACAAGTTCCTCGATCCGAAAAGCTCGGAATCGGGCCTGCCGCATCATTCCGACGGGCGGCGCG....................................................................................................  >  NC_014034/1830814‑1830922
....................................................................................................GGCGGCGCGGCAGGGTGATCTGTGGCGCATCGAGACCGAGGGGCCCGCGGGCAAGGCCGTGCATCTGGCCCGCGGTCTGGTCAATGCCGCCGGGCCCTGGGTCGGGCAG  <  NC_014034/3403206‑3403107

Base quality scores:  ATCG  < 3 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG