New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1855107	207 (0.930)	3 (0.010)	2/188	37.5	0.01	coding (467/507 nt)	RCAP_rcc01722	BadM/Rrf2 family transcriptional regulator
	?	NC_014034	= 2319301	228 (0.960)					coding (2345/2709 nt)	acnA	aconitate hydratase
Rejected: Position hash score below cutoff.

GCAGGCGCAAACCCTGCGGGGCCGTGAGAAATCCGTTGATTTCGAAACATTTCCGTGAGGAGCGGTCAGACGTCCAGATCCGCCGTCAGCGTCGCGCGGGCCCGCG....................................................................................................  >  NC_014034/1855002‑1855107 ....................................................................................................CCCGCGCCGTATTCGATGCCGCCAAAGATCACCAGCGGGATATTCGCCGCCTGATAGGCCATCGAGGCGTCATAGATCGAGGTTTGCACCCCGTCCGGCCCCTTGG  <  NC_014034/2319301‑2319202                                                                                                                                                                                                                                                        TTCGAAACATTTCCGTGAGGAGCGGTCAGACGTCCAGATCCGCCGTCAGCGTCGCGCGGGCCCGCGCCGTATTCGATGCCGCCAAAGATCACCAGCGGGAT                                                                   >  2:2677669/1‑101 (MQ=255)                                                                              ATCCGCCGTCAGCGTCGCGCGGGCCCGCGCCGTATTCGATGCCGCCAAAGATCACCAGCGGGATATTCGCCGCCTGATAGGCCATCGAGGCGTCATAGATC                              <  1:2677854/101‑1 (MQ=255)                                                                                                  aGGCCCGCGCCGTATTCGATGCCGCCAAAGATCACCAGCGGGATATTCGCCGCCTGATAGGCCATCGAGGCGTCATAGATCGAGGTTTGCACCCCGTCCGG          >  2:3720902/2‑101 (MQ=255)                                                                                                                                                                                                                GCAGGCGCAAACCCTGCGGGGCCGTGAGAAATCCGTTGATTTCGAAACATTTCCGTGAGGAGCGGTCAGACGTCCAGATCCGCCGTCAGCGTCGCGCGGGCCCGCG....................................................................................................  >  NC_014034/1855002‑1855107 ....................................................................................................CCCGCGCCGTATTCGATGCCGCCAAAGATCACCAGCGGGATATTCGCCGCCTGATAGGCCATCGAGGCGTCATAGATCGAGGTTTGCACCCCGTCCGGCCCCTTGG  <  NC_014034/2319301‑2319202 Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 26 ≤  ATCG  < 31 ≤  ATCG  < 40 ≤  ATCG