New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1942242 =	218 (1.020)	2 (0.010)	2/180	36.7	0.01	coding (258/2250 nt)	ntrY	nitrogen regulation protein NtrY
	?	NC_014034	2119760 =	199 (0.840)					coding (461/2121 nt)	RCAP_rcc01957	hypothetical protein
Rejected: Position hash score below cutoff.

CGATGTTGACGGTCAGCCCGGCAAAGAGCGCCACCAGCACGGTGGGCACCAGCGCGATTCCGGCAAAGACCCCGGTCAGCCGCAATGTCAGCCGCGAGCCCGTCGCCCGC....................................................................................................  <  NC_014034/1942351‑1942242 ....................................................................................................CGTCGCCCGCAGCTGCGGCGAAAAGGTCTTGCTCGCCACCACATATTCGCCGCCATAGATGCCGGTGCCGACAAGGTCGTTGACCCCGATGGCAAAGGCCGGACGGTAGG  >  NC_014034/2119760‑2119859                                                                                                                                                                                                                                                                       atctGATTCCGGCAAAGACCCCGGTCAGCCGCAATGTCAGCCGCGAGCCCGTCGCCCGCAGCTGCGGCGAAAAGGTCTTGCTCGCCACCACATATTCGCCG                                                            <  2:2260363/97‑1 (MQ=255)                                                        GATTCCGGCAAAGACCCCGGTCAGCCGCAATGTCAGCCGCGAGCCCGTCGCCCGCAGCTGCGGCGAAAAGGTCTTGCTCGCCACCACATATTCGCCGagat                                                        >  1:2260525/1‑97 (MQ=255)                                                                                                                                                                                                                    CGATGTTGACGGTCAGCCCGGCAAAGAGCGCCACCAGCACGGTGGGCACCAGCGCGATTCCGGCAAAGACCCCGGTCAGCCGCAATGTCAGCCGCGAGCCCGTCGCCCGC....................................................................................................  <  NC_014034/1942351‑1942242 ....................................................................................................CGTCGCCCGCAGCTGCGGCGAAAAGGTCTTGCTCGCCACCACATATTCGCCGCCATAGATGCCGGTGCCGACAAGGTCGTTGACCCCGATGGCAAAGGCCGGACGGTAGG  >  NC_014034/2119760‑2119859 Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG