New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	2089070 =	170 (0.750)	2 (0.010)	2/190	37.8	0.01	coding (487/594 nt)	RCAP_rcc01931	resolvase
	?	NC_014034	= 3220159	212 (0.890)					coding (388/816 nt)	RCAP_rcc03028	hypothetical protein
Rejected: Position hash score below cutoff.

AAGGCATCGCCAAGGCGAAGGCCGAGGGCAAATACAAGGGCCGCGCCCCCACCGCCCGCGCCAAGGCCGAAGAGGTGCTGCGGCTGCAAGCGGAAGGCATCGGCG....................................................................................................  <  NC_014034/2089174‑2089070 ....................................................................................................CGGCGTCACCTCGCGAAAGCGCACGAAACCATGCATCTTGTGGATGTCCCGCCCGACCGCCTTTTGCTGATCGAGCAGCCGCCGCAAGGCCGGGTCGGATCGATC  <  NC_014034/3220159‑3220060                                                                                                                                                                                                                                                              CCCACCGCCCGCGCCAAGGCCGAAGAGGTGCTGCGGCTGCAAGCGGAAGGCATCGGCGTCACCTCGCGAAAGCGCACGAAACCATGCATCTTGTGGATGTC                                                           >  1:4618792/1‑101 (MQ=255)                                                   ACCGCCCGCGCCAAGGCCGAAGAGGTGCTGCGGCTGCAAGCGGAAGGCATCGGCGTCACCTCGCGAAAGCGCACGAAACCATGCATCTTGTGGATGTCCCG                                                        <  2:4618491/101‑1 (MQ=255)                                                                                                                                                                                                               AAGGCATCGCCAAGGCGAAGGCCGAGGGCAAATACAAGGGCCGCGCCCCCACCGCCCGCGCCAAGGCCGAAGAGGTGCTGCGGCTGCAAGCGGAAGGCATCGGCG....................................................................................................  <  NC_014034/2089174‑2089070 ....................................................................................................CGGCGTCACCTCGCGAAAGCGCACGAAACCATGCATCTTGTGGATGTCCCGCCCGACCGCCTTTTGCTGATCGAGCAGCCGCCGCAAGGCCGGGTCGGATCGATC  <  NC_014034/3220159‑3220060 Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG