New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2193216 =181 (0.860)2 (0.010) 2/178 36.5 0.01 coding (1243/2490 nt) cobZ precorrin 3B synthase CobZ
?NC_014034 2354263 = 237 (1.000)intergenic (‑228/‑99) RCAP_rcc02182/potG2 class III aminotransferase/polyamine ABC transporter ATP‑binding protein PotG
Rejected: Position hash score below cutoff.

TCCCCGGCATCGGCTTCACCCGCTACGGGCTGGTGGTGGACGCCTTTGCCCGGGTGCGTCTGAACGATGCCGTCGCCCCCAGACTTTTCGCAGCCGGAACAAATATGTGCG....................................................................................................  <  NC_014034/2193326‑2193216
....................................................................................................AAATATGTGCGTTCGATCAAGGATTTCGCGGCGCCCGCAAGAAACCCTTGCCAGCACGGCGGATCGCCACAACACTCGACCCAATATGATCAAATCCGAAAGGATCCGGCG  >  NC_014034/2354263‑2354362
                                                                                                                                                                                                                   
                                                                      tcTCGCCCCCAGACTTTTCGCAGCCGGAACAAATATGTGCGTTCGATCAAGGATTTCGCGGCGCCCGCAAGAAACCCTTGCCAGCACGGCGGATCGCCACA                                          <  1:3339549/99‑1 (MQ=255)
                                                                         CGCCCCCAGACTTTTCGCAGCCGGAACAAATATGTGCGTTCGATCAAGGATTTCGCGGCGCCCGCAAGAAACCCTTGCCAGCACGGCGGATCGCCACAAga                                       >  2:3339300/1‑99 (MQ=255)
                                                                                                                                                                                                                   
TCCCCGGCATCGGCTTCACCCGCTACGGGCTGGTGGTGGACGCCTTTGCCCGGGTGCGTCTGAACGATGCCGTCGCCCCCAGACTTTTCGCAGCCGGAACAAATATGTGCG....................................................................................................  <  NC_014034/2193326‑2193216
....................................................................................................AAATATGTGCGTTCGATCAAGGATTTCGCGGCGCCCGCAAGAAACCCTTGCCAGCACGGCGGATCGCCACAACACTCGACCCAATATGATCAAATCCGAAAGGATCCGGCG  >  NC_014034/2354263‑2354362

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG