New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 221943 =224 (1.000)0 (0.000) 3/188 36.3 0.00 coding (714/2748 nt) RCAP_rcc00185 hypothetical protein
?NC_014034 = 222122 226 (0.950)coding (535/2748 nt) RCAP_rcc00185 hypothetical protein
Rejected: Position hash score below cutoff.

TCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACCGAGCCCACG....................................................................................................  <  NC_014034/222048‑221943
....................................................................................................CCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGG  <  NC_014034/222122‑222023
                                                                                                                                                                                                              
                                              CCGACCGATCCCACGGACCCGACCGATCCCACGGACCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCC                                                             <  2:706240/101‑1 (MQ=0)
                                                GACCGATCCCACGGACCCGACCGATCCCACGGACCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGA                                                           >  1:3236324/1‑101 (MQ=0)
                                                GACCGATCCCACGGACCCGACCGATCCCACGGACCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGA                                                           <  1:3364341/101‑1 (MQ=0)
                                                GACCGATCCCACGGACCCGACCGATCCCACGGACCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGA                                                           <  1:3435385/101‑1 (MQ=0)
                                                GACCGATCCCACGGACCCGACCGATCCCACGGACCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGA                                                           <  1:85166/101‑1 (MQ=0)
                                                  CCGATCCCACGGACCCGACCGATCCCACGGACCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACc                                                         >  1:61080/1‑100 (MQ=0)
                                                                                                                                                                                                              
TCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACCGAGCCCACG....................................................................................................  <  NC_014034/222048‑221943
....................................................................................................CCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGG  <  NC_014034/222122‑222023

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 23 ≤  ATCG  < 31 ≤  ATCG  < 40 ≤  ATCG