New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 221953 =283 (1.220)13 (0.060) 8/196 32.2 0.04 coding (704/2748 nt) RCAP_rcc00185 hypothetical protein
?NC_014034 = 222123 295 (1.240)coding (534/2748 nt) RCAP_rcc00185 hypothetical protein
Rejected: Position hash score below cutoff.

GACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGAC...................................................................................................  <  NC_014034/222054‑221953
....................................................................................................ACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCAC  <  NC_014034/222123‑222025
                                                                                                                                                                                                         
    GATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATACGACCGATCCCACGGACCCGACCGATCCGACGGA                                                                                                  >  2:3019721/1‑101 (MQ=0)
         gACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGc                                                                                             >  1:586132/2‑100 (MQ=12)
         gACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGA                                                                                             >  1:125622/2‑101 (MQ=12)
           CGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACC                                                                                           >  2:4485895/1‑101 (MQ=9)
            GGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCG                                                                                          <  2:2874051/101‑1 (MQ=0)
             gacCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGA                                                                                         >  2:284395/4‑101 (MQ=0)
              acCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGAc                                                                                        >  1:533978/3‑100 (MQ=0)
                 CGACCCATCCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCC                                                                                     <  1:1060310/101‑1 (MQ=0)
                  GACCGATCCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGACCCGACGGACCCGACCGATCCCA                                                                                    >  1:2889614/1‑101 (MQ=0)
                   cCCGATCCCACGGACCCGACCGATCCCACGGACCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCAC                                                                                   <  2:64008/100‑1 (MQ=0)
                     CGATCCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGCCGGACCCGACCGATCCCACGc                                                                                 >  1:506428/1‑100 (MQ=0)
                      GATCCCACGGCCCCGACCGATCCCACGGACCCTACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGA                                                                                <  2:3990485/101‑1 (MQ=0)
                      GATCCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCCATCCCACGcc                                                                                >  1:3682748/1‑99 (MQ=0)
                                                                                                                                                                                                         
GACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGAC...................................................................................................  <  NC_014034/222054‑221953
....................................................................................................ACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCAC  <  NC_014034/222123‑222025

Base quality scores:  ATCG  < 3 ≤  ATCG  < 10 ≤  ATCG  < 20 ≤  ATCG  < 30 ≤  ATCG  < 40 ≤  ATCG