New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 221956 =286 (1.450)44 (0.220) 3/166 33.9 0.24 coding (701/2748 nt) RCAP_rcc00185 hypothetical protein
?NC_014034 = 222063 NA (NA)coding (594/2748 nt) RCAP_rcc00185 hypothetical protein
Rejected: Position hash score below cutoff.

GACCGATCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCC................................................................................................  <  NC_014034/222072‑221956
....................................................................................................ACGGACCCGACCGATCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGA  <  NC_014034/222063‑221968
                                                                                                                                                                                                                     
                                   ccACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCC                                                                               <  2:2288897/99‑1 (MQ=0)
                                            cgACGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCG                                                                      <  1:2636330/99‑1 (MQ=0)
                                            cgACGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCG                                                                      >  2:497135/3‑101 (MQ=0)
                                              ACGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGAC                                                                    <  2:585364/101‑1 (MQ=0)
                                              ACGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGAC                                                                    <  1:2729808/101‑1 (MQ=0)
                                              ACGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGAC                                                                    <  1:1910795/101‑1 (MQ=0)
                                               CGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACC                                                                   >  2:1812326/1‑101 (MQ=2)
                                                      GACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCA                                                            <  2:4545851/101‑1 (MQ=9)
                                                       gCCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCAC                                                           <  1:3198622/100‑1 (MQ=12)
                                                       ACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCAC                                                           >  2:1637334/1‑101 (MQ=12)
                                                       ACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCAC                                                           >  2:1164612/1‑101 (MQ=12)
                                                       ACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCAC                                                           <  1:2793970/101‑1 (MQ=9)
                                                        CCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACG                                                          >  1:1583124/1‑101 (MQ=16)
                                                         CGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGG                                                         >  2:4506131/1‑101 (MQ=12)
                                                         CGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGG                                                         >  1:2282848/1‑101 (MQ=12)
                                                          GATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGg                                                        >  1:2969098/1‑100 (MQ=12)
                                                          GATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGA                                                        >  1:972700/1‑101 (MQ=12)
                                                          GATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGA                                                        >  1:2097969/1‑101 (MQ=12)
                                                          GATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGA                                                        >  1:1829505/1‑101 (MQ=12)
                                                           ATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGAt                                                       <  2:375838/101‑2 (MQ=12)
                                                            TCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGAtc                                                      <  1:173510/101‑3 (MQ=12)
                                                                ACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGAC                                                  >  2:1336018/1‑101 (MQ=0)
                                                                            GATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGA                                      <  1:3607149/101‑1 (MQ=0)
                                                                                  ACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGAC                                >  2:642908/1‑101 (MQ=0)
                                                                                  ACGGACCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGAC                                <  1:1031052/101‑1 (MQ=0)
                                                                                        CCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCC                          <  1:1183519/101‑1 (MQ=0)
                                                                                        CCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCC                          >  2:4367089/1‑101 (MQ=0)
                                                                                         CGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCC                         <  1:346224/101‑1 (MQ=0)
                                                                                         CGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCC                         >  2:3985571/1‑101 (MQ=0)
                                                                                         CGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCC                         <  1:4103302/101‑1 (MQ=0)
                                                                                         CGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCC                         <  1:770790/101‑1 (MQ=0)
                                                                                          GACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCA                        <  2:1280464/101‑1 (MQ=0)
                                                                                          GACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCA                        <  1:2104185/101‑1 (MQ=0)
                                                                                           ACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCAC                       <  1:2900107/101‑1 (MQ=0)
                                                                                           ACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCAC                       >  2:4277015/1‑101 (MQ=0)
                                                                                           ACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCAC                       >  2:3821984/1‑101 (MQ=0)
                                                                                           ACCGACCCCACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCAC                       <  1:1820643/101‑1 (MQ=0)
                                                                                            CCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACG                      <  2:1829379/101‑1 (MQ=0)
                                                                                             CGATCCTACGGACCCGTCCGATCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGG                     <  2:2364124/101‑1 (MQ=0)
                                                                                             CGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGG                     <  1:3362348/101‑1 (MQ=0)
                                                                                             CGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGG                     >  2:1253427/1‑101 (MQ=0)
                                                                                              GATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGA                    >  2:2105845/1‑101 (MQ=0)
                                                                                              GATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGA                    >  1:1751753/1‑101 (MQ=0)
                                                                                                   CACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGA               <  1:3019698/101‑1 (MQ=2)
                                                                                                                                                                                                                     
GACCGATCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCC................................................................................................  <  NC_014034/222072‑221956
....................................................................................................ACGGACCCGACCGATCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGA  <  NC_014034/222063‑221968

Base quality scores:  ATCG  < 3 ≤  ATCG  < 16 ≤  ATCG  < 24 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG