New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 221974 =716 (4.780)7 (0.050) 4/126 27.3 0.02 coding (683/2748 nt) RCAP_rcc00185 hypothetical protein
?NC_014034 = 222107 153 (0.640)coding (550/2748 nt) RCAP_rcc00185 hypothetical protein
Rejected: Position hash score below cutoff.

CGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCC.............................................................................  <  NC_014034/222043‑221974
...........................................................................................................ACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCG  <  NC_014034/222107‑222068
                                                                      |||||||||||||||||||||||||||||||||||||                                        
cggccCCGACCGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACC                                                <  1:4092010/96‑1 (MQ=2)
     CCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACCGACCCTACCGATCC                                           >  2:3550932/1‑101 (MQ=0)
      CGACCGGTCCCACGGACCCGACCGATCCCAGGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCc                                          <  1:2127287/101‑2 (MQ=0)
      CGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGCCGGACCCGACCGATCCCACGGACCCGGCCGATCCc                                          >  1:377669/1‑100 (MQ=0)
        ACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCCACCGATCCGACGGCCCCGACCGATCCCACGGACCCGACCGATCCGAC                                        >  1:269126/1‑101 (MQ=255)
         CCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATagatcg                                       >  1:1258091/1‑95 (MQ=0)
                CACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGA                                <  2:660527/101‑1 (MQ=2)
                          cCCGATCCCACGGACCCGACCGATCCCACGGACCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCAC                      <  2:64008/100‑1 (MQ=0)
                                      gtcCCGACCGATCCCACGGACCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACGGA          <  2:4634602/98‑1 (MQ=2)
                                        cCCGACCGACCCCACGGACCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACGGACC        <  1:3531325/100‑1 (MQ=255)
                                         CCGACCGATCCCACGGATCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACGGACCC       <  1:1939130/101‑1 (MQ=12)
                                              CGATCCCACGGACCCCACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACGGACCCCACgg  <  1:674886/101‑3 (MQ=255)
                                                                      |||||||||||||||||||||||||||||||||||||                                        
CGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCC.............................................................................  <  NC_014034/222043‑221974
...........................................................................................................ACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCG  <  NC_014034/222107‑222068

Base quality scores:  ATCG  < 3 ≤  ATCG  < 12 ≤  ATCG  < 21 ≤  ATCG  < 30 ≤  ATCG  < 40 ≤  ATCG