New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2267942 =250 (1.110)2 (0.010) 2/190 37.8 0.01 coding (188/762 nt) RCAP_rcc02108 hypothetical protein
?NC_014034 = 3144351 214 (0.900)coding (333/2484 nt) RCAP_rcc02954 mechanosensitive ion channel family protein
Rejected: Position hash score below cutoff.

GGACCTGGCAGTCCTTTGGCTTCTGCTACTGGCCGCAATGATCTTCTTGGGGAACTGGTCGCTGGTAATCGATCACTGGCTGGCCGAACGCGCGATCGTGCTGAA....................................................................................................  <  NC_014034/2268046‑2267942
....................................................................................................CTGAACACCCAGCTTTCAAAGCTTCAGGCGCCGGGGATCTCGGCGACCGAGGCTGCAAGCCGCTCGGATGCGATCATCCGTGCCATCGACAAGCTGATCCGCGAA  <  NC_014034/3144351‑3144252
                                                                                                                                                                                                             
                                                                       ATCACTGGCTGGCCGAACGCGCGATCGTGCTGAACACCCAGCTTTCAAAGCTTCAGGCGCCGGGGATCTCGGCGACCGAGGCTGCAAGCCGCTCGGATGCG                                   >  2:2105496/1‑101 (MQ=255)
                                                                          ACTGGCTGGCCGAACGCGCGATCGTGCTGAACACCCAGCTTTCAAAGCTTCAGGCGCCGGGGATCTCGGCGACCGAGGCTGCAAGCCGCTCGGATGCGATC                                <  1:2105646/101‑1 (MQ=255)
                                                                                                                                                                                                             
GGACCTGGCAGTCCTTTGGCTTCTGCTACTGGCCGCAATGATCTTCTTGGGGAACTGGTCGCTGGTAATCGATCACTGGCTGGCCGAACGCGCGATCGTGCTGAA....................................................................................................  <  NC_014034/2268046‑2267942
....................................................................................................CTGAACACCCAGCTTTCAAAGCTTCAGGCGCCGGGGATCTCGGCGACCGAGGCTGCAAGCCGCTCGGATGCGATCATCCGTGCCATCGACAAGCTGATCCGCGAA  <  NC_014034/3144351‑3144252

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG