New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2283233 =NA (NA)2 (0.010) 2/184 37.1 0.02 coding (377/396 nt) RCAP_rcc02122 response regulator receiver protein
?NC_014034 3355315 = 193 (0.810)coding (147/747 nt) RCAP_rcc03158 n‑formylglutamate amidohydrolase
Rejected: Position hash score below cutoff.

CGGCGCTGGAGCGGCGCAAGGCGCTGGCGCTTGGCGCCGACGGGTTCATCGCCAAACCCTTCGAGCTGAAGGAGCTGCGCGACGAATTGCACCGGCTGCTGGACCCGG....................................................................................................  <  NC_014034/2283332‑2283233
....................................................................................................GGACCCGGGCGCGCTGGAGGTGGCCCGGCATCTGGCAGAGGCGCTCGAGAGCCCGCTGATCTGGTCGGATTTCTCGCGGCTCGTCATCGACCCGAACCGCGGCGAGGA  >  NC_014034/3355315‑3355422
                                                                                                                                                                                                                
                               TGGCGCCGACGGGTTCATCGCCAAACCCTTCGAGCTGAAGGAGCTGCGCGACGAATTGCACCGGCTGCTGGACCCGGGCGCGCTGGAGGTGGCCCGGCATC                                                                              >  1:2729189/1‑101 (MQ=255)
                                         GGGTTCATCGCCAAACCCTTCGAGCTGAAGGAGCTGCGCGACGAATTGCACCGGCTGCTGGACCCGGGCGCGCTGGAGGTGGCCCGGCATCTGGCAGAGGC                                                                    <  2:2728991/101‑1 (MQ=255)
                                                                                                                                                                                                                
CGGCGCTGGAGCGGCGCAAGGCGCTGGCGCTTGGCGCCGACGGGTTCATCGCCAAACCCTTCGAGCTGAAGGAGCTGCGCGACGAATTGCACCGGCTGCTGGACCCGG....................................................................................................  <  NC_014034/2283332‑2283233
....................................................................................................GGACCCGGGCGCGCTGGAGGTGGCCCGGCATCTGGCAGAGGCGCTCGAGAGCCCGCTGATCTGGTCGGATTTCTCGCGGCTCGTCATCGACCCGAACCGCGGCGAGGA  >  NC_014034/3355315‑3355422

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG