New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 242718 =217 (1.030)2 (0.010) 2/178 36.5 0.01 coding (901/1230 nt) argG argininosuccinate synthase
?NC_014034 = 2118675 218 (0.920)coding (1546/2121 nt) RCAP_rcc01957 hypothetical protein
Rejected: Position hash score below cutoff.

CGTCTTGTCGATCAGCGCCTGCAGCGCCTCGCGTTCGGGGCTGAACCAGAAGCCGTTGTAGATCAGCTCCGCATAGCGCGGCATGATGCTGTCCTTCAGGTGACCGGCGCC....................................................................................................  <  NC_014034/242828‑242718
....................................................................................................TGACCGGCGCCTGGTATGTCCGGCCCGGGCGGGATCTTTATGGCCGGGTGACCGTCGGCCTGCTGGAACAGATGTATGGCGGGGTGTCCTCGGAACTGCTGTGGAAGCCGC  <  NC_014034/2118675‑2118576
                                                                                                                                                                                                                   
                                         TGAACCAGAAGCCGTTGTAGATCAGCTCCGCATAGCGCGGCATGATGCTGTCCTTCAGGTGACCGGCGCCTGGTATGTCCGGCCCGGGCGGGATCTTTATG                                                                       >  1:1492532/1‑101 (MQ=255)
                                                       TTGTAGATCAGCTCCGCATAGCGCGGCATGATGCTGTCCTTCAGGTGACCGGCGCCTGGTATGTCCGGCCCGGGCGGGATCTTTATGGCCGGGTGACCGTC                                                         <  2:1492423/101‑1 (MQ=255)
                                                                                                                                                                                                                   
CGTCTTGTCGATCAGCGCCTGCAGCGCCTCGCGTTCGGGGCTGAACCAGAAGCCGTTGTAGATCAGCTCCGCATAGCGCGGCATGATGCTGTCCTTCAGGTGACCGGCGCC....................................................................................................  <  NC_014034/242828‑242718
....................................................................................................TGACCGGCGCCTGGTATGTCCGGCCCGGGCGGGATCTTTATGGCCGGGTGACCGTCGGCCTGCTGGAACAGATGTATGGCGGGGTGTCCTCGGAACTGCTGTGGAAGCCGC  <  NC_014034/2118675‑2118576

Base quality scores:  ATCG  < 3 ≤  ATCG  < 32 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG