New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2439092201 (0.880)2 (0.010) 2/192 38.0 0.01 coding (273/945 nt) RCAP_rcc02264 hypothetical protein
?NC_014034 = 3218271 234 (0.990)coding (359/594 nt) dctR3 C4‑dicarboxylate transport transcriptional regulatory protein DctR
Rejected: Position hash score below cutoff.

ACCCGGCGCAGGGCATGAAGATCGTGCGGCCGCCGCGGATCGAGCCCGTCGCGCTGGAGGCGATCGCGCGGGGCGGTCTGGCGGGCATCGGCCCCTGCGACGCG....................................................................................................  >  NC_014034/2438989‑2439092
....................................................................................................CGCGATCGCAGACAGGGCGATATCGACGATGTGGTTGTCGTTGAAGGGTTTTTCGACGAAATCAAAGGCCCCCGCCTTCAGCGATTGCACGGCGAGCGGCACAT  <  NC_014034/3218271‑3218172
                                                                                                                                                                                                            
                                              CGTCGCGCTGGAGGCGATCGCGCGGGGCGGTCTGGCGGGCATCGGCCCCTGCGACGCGATCGCAGACAGGGCGATATCGACGATGTGGTTGTCGTTGAAGG                                                           >  2:2466818/1‑101 (MQ=255)
                                                  GCGCTGGAGGCGATCGCGCGGGGCGGTCTGGCGGGCATCGGCCCCTGCGACGCGATCGCAGACAGGGCGATATCGACGATGTGGTTGTCGTTGAAGGGTTT                                                       <  1:2466984/101‑1 (MQ=255)
                                                                                                                                                                                                            
ACCCGGCGCAGGGCATGAAGATCGTGCGGCCGCCGCGGATCGAGCCCGTCGCGCTGGAGGCGATCGCGCGGGGCGGTCTGGCGGGCATCGGCCCCTGCGACGCG....................................................................................................  >  NC_014034/2438989‑2439092
....................................................................................................CGCGATCGCAGACAGGGCGATATCGACGATGTGGTTGTCGTTGAAGGGTTTTTCGACGAAATCAAAGGCCCCCGCCTTCAGCGATTGCACGGCGAGCGGCACAT  <  NC_014034/3218271‑3218172

Base quality scores:  ATCG  < 3 ≤  ATCG  < 23 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG