New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	2485379 =	165 (0.760)	3 (0.010)	3/184	35.9	0.02	coding (173/174 nt)	RCAP_rcc02310	hypothetical protein
	?	NC_014034	= 3523585	221 (0.930)					coding (501/1227 nt)	ubiF	2‑octaprenyl‑3‑methyl‑6‑methoxy‑1,4‑benzoquinol hydroxylase
Rejected: Position hash score below cutoff.

TGTGAGGCTGACGGAGCGATGAAAGAAACCGGCCCCCGCGGGGGCCGGTTTTGTTTTGCCAACGGTGTTCGGGCGGATCAGAAAAGGCATCGCCTTTTCCCGCCCGTC....................................................................................................  <  NC_014034/2485486‑2485379 ....................................................................................................CGCCCGTCCGCGCCGATCAGCACCCGGCCCGACAGGCTCTCGCCGTTTGAAAGCGTCACCCGGATCGATCCGGGCAGGACCTCCTGCGCCACGACCGAGGTTTCGGAA  <  NC_014034/3523585‑3523486                                                                                                                                                                                                                           GACGGAGCGATGAAAGAAACCGGCCCCCGCGGGGGCCGGTTTTGTTTTGCCAACGGTGTTCGGGCGGATCAGAAAAGGCATCGCCTTTTCCCGCCCGTCCG                                                                                                    >  1:1127703/1‑101 (MQ=255)                                        GGGGGCCGGTTTTGTTTTGCCAACGGTGTTCGGGCGGATCAGAAAAGGCATCGCCTTTTCCCGCCCGTCCGCGCCGATCAGCACCCGGCCCGACAGGCTCT                                                                      >  1:2901290/1‑101 (MQ=255)                                                     GTTTTGCCAACGGTGTTCGGGCGGATCAGAAAAGGCATCGCCTTTTCCCGCCCGTCCGCGCCGATCAGCACCCGGCCCGACAGGCTCTCGCCGTTTGAAAG                                                         <  2:2901074/101‑1 (MQ=255)                                                                                                                                                                                                                  TGTGAGGCTGACGGAGCGATGAAAGAAACCGGCCCCCGCGGGGGCCGGTTTTGTTTTGCCAACGGTGTTCGGGCGGATCAGAAAAGGCATCGCCTTTTCCCGCCCGTC....................................................................................................  <  NC_014034/2485486‑2485379 ....................................................................................................CGCCCGTCCGCGCCGATCAGCACCCGGCCCGACAGGCTCTCGCCGTTTGAAAGCGTCACCCGGATCGATCCGGGCAGGACCTCCTGCGCCACGACCGAGGTTTCGGAA  <  NC_014034/3523585‑3523486 Base quality scores:  ATCG  < 3 ≤  ATCG  < 22 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG