New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 255204 =249 (1.120)2 (0.010) 2/188 37.5 0.01 coding (853/2715 nt) secA preprotein translocase subunit SecA
?NC_014034 1448855 = 254 (1.070)coding (675/909 nt) RCAP_rcc01347 pirin domain‑containing protein
Rejected: Position hash score below cutoff.

CGGCGACGACATAGTTCTGATCCTTGAAGAACAGCTTGTGCGCCCGAAGCGCCTGGCCGATGTGGTGCACGATCGTCGTGCTTTCCGGGTCGTAAAGCGACTGGCC....................................................................................................  <  NC_014034/255309‑255204
....................................................................................................CTGGCCGCGAAATTCCTTCTCGACCTGGATGCCCACCGGATCGGCTGCATCGCGAAACGTCCCCGATCCGGCAAAGACATAGGCCAGCGCATTGGCGCGGGTGTCG  >  NC_014034/1448855‑1448954
                                                                                                                                                                                                              
                                                       GCCGATGTGGTGCACGATCGTCGTGCTTTCCGGGTCGTAAAGCGACTGGCCGCGAAATTCCTTCTCGACCTGGATGCCCACCGGATCGGCTGCATCGCGAA                                                    >  2:1496555/1‑101 (MQ=255)
                                                                            CGTGCTTTCCGGGTCGTAAAGCGACTGGCCGCGAAATTCCTTCTCGACCTGGATGCCCACCGGATCGGCTGCATCGCGAAACGTCCCCGATCCGGCAAAGA                               <  1:1496664/101‑1 (MQ=255)
                                                                                                                                                                                                              
CGGCGACGACATAGTTCTGATCCTTGAAGAACAGCTTGTGCGCCCGAAGCGCCTGGCCGATGTGGTGCACGATCGTCGTGCTTTCCGGGTCGTAAAGCGACTGGCC....................................................................................................  <  NC_014034/255309‑255204
....................................................................................................CTGGCCGCGAAATTCCTTCTCGACCTGGATGCCCACCGGATCGGCTGCATCGCGAAACGTCCCCGATCCGGCAAAGACATAGGCCAGCGCATTGGCGCGGGTGTCG  >  NC_014034/1448855‑1448954

Base quality scores:  ATCG  < 3 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 40 ≤  ATCG