New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2649573 =224 (1.010)2 (0.010) 2/186 37.3 0.01 intergenic (+6/‑80) RCAP_rcc02468/RCAP_rcc02469 thioesterase superfamily protein/ErfK/YbiS/YcfS/YnhG family protein
?NC_014034 3587583 = 241 (1.010)coding (20/1560 nt) emrB multidrug resistance protein B
Rejected: Position hash score below cutoff.

ACTCGTCAGAAAAGTGCGGCGATACATGCAGGTCTCCCGGTTCCGTTGCGGCAGGCTAGCAAAGCGCCTGCCGCCACTCAACGCCAAAAGGGCAGCCCGGGTTCCGG....................................................................................................  <  NC_014034/2649679‑2649573
....................................................................................................GTTCCGGTCAAGCATCACGGGCTGATCACCGCCTCCCTGATGCTGGCCACGATCATGCAGGTGCTCGACACCACCATCGCCAATGTCGCCCTGCCCTCGATGCGCTC  >  NC_014034/3587583‑3587682
                                                                                                                                                                                                               
                             AGGTCTCCCGGTTCCGTTGCGGCAGGCTAGCAAAGCGCCTGCCGCCACTCAACGCCAAAAGGGCAGCCCGGGTTCCGGTCAAGCATCACGGGCTGATCACC                                                                               >  1:1691616/1‑101 (MQ=255)
                                   CCCGGTTCCGTTGCGGCAGGCTAGCAAAGCGCCTGCCGCCACTCAACGCCAAAAGGGCAGCCCGGGTTCCGGTCAAGCATCACGGGCTGATCACCGCCTCC                                                                         <  2:1691505/101‑1 (MQ=255)
                                                                                                                                                                                                               
ACTCGTCAGAAAAGTGCGGCGATACATGCAGGTCTCCCGGTTCCGTTGCGGCAGGCTAGCAAAGCGCCTGCCGCCACTCAACGCCAAAAGGGCAGCCCGGGTTCCGG....................................................................................................  <  NC_014034/2649679‑2649573
....................................................................................................GTTCCGGTCAAGCATCACGGGCTGATCACCGCCTCCCTGATGCTGGCCACGATCATGCAGGTGCTCGACACCACCATCGCCAATGTCGCCCTGCCCTCGATGCGCTC  >  NC_014034/3587583‑3587682

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 24 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG