| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_014034 | 279830 = | 249 (1.130) | 2 (0.010) | 2/186 | 37.3 | 0.01 | coding (153/828 nt) | dapD | 2,3,4,5‑tetrahydropyridine‑2,6‑dicarboxylate N‑succinyltransferase |
| ? | NC_014034 | = 2846225 | 272 (1.150) | coding (1280/1467 nt) | RCAP_rcc02656 | hypothetical protein | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
ACCAGGTGCCGTTCTGCGGCCCGCCCGAATGCACTTCCATGTCCTTGAGACGGAAGCCCAGCAGCACGGCCTTTTTCGCCCATTGGTTCACATGCCAATTGCCGTCG.................................................................................................... < NC_014034/279936‑279830
....................................................................................................GCCGTCGCCCATGTGCCCCATCTGCGCAAGCTGATGAAATTCGTCAGCCACAACGGCTTTGAACACCATGTCGCAATGGTGCGCGGCCATGTGGCCGATGTGCTGAA < NC_014034/2846225‑2846126
CCTTGAGACGGAAGCCCAGCAGCACGGCCTTTTTCGCCCATTGGTTCACATGCCAATTGCCGTCGCCCATGTGCCCCATCTGCGCAAGCTGATGAAATTCG > 1:1820335/1‑101 (MQ=255)
GACGGAAGCCCAGCAGCACGGCCTTTTTCGCCCATTGGTTCACATGCCAATTGCCGTCGCCCATGTGCCCCATCTGCGCAAGCTGATGAAATTCGTCAGCC < 2:1820209/101‑1 (MQ=255)
ACCAGGTGCCGTTCTGCGGCCCGCCCGAATGCACTTCCATGTCCTTGAGACGGAAGCCCAGCAGCACGGCCTTTTTCGCCCATTGGTTCACATGCCAATTGCCGTCG.................................................................................................... < NC_014034/279936‑279830
....................................................................................................GCCGTCGCCCATGTGCCCCATCTGCGCAAGCTGATGAAATTCGTCAGCCACAACGGCTTTGAACACCATGTCGCAATGGTGCGCGGCCATGTGGCCGATGTGCTGAA < NC_014034/2846225‑2846126
Base quality scores:
ATCG
< 3 ≤
ATCG
< 33 ≤
ATCG
< 34 ≤
ATCG
< 35 ≤
ATCG
< 41 ≤
ATCG
|