New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2800484 =118 (0.550)2 (0.010) 2/182 36.9 0.01 coding (2569/2643 nt) mcpA3 methyl‑accepting chemotaxis protein McpA
?NC_014034 3610969 = 196 (0.830)coding (387/861 nt) hutG N‑formylglutamate amidohydrolase
Rejected: Position hash score below cutoff.

CGGCTATTCGACCTATCGCGGCAGTTGAGCCGGATCAGAAATCTTCCCAGTTGTCCTCGGCAGGCGCCTGTTTGACCGCCAGATTCGAGGCCCGGGCACTGGCGCGCGG...................................................................................................  <  NC_014034/2800592‑2800484
....................................................................................................GGCGCGCGGGATCTTGCCGCGGAAAATCTCGCGCCCGCCGGCGACGACGCGCGGAATCACCCCCAGCCCGGTCAGCACCCTTGCCCCGCCCGAGCCCCGGGTCACCCC  >  NC_014034/3610969‑3611067
                                                                                                                                                                                                                
                                   CAGAAATCTTCCCAGTTGTCCTCGGCAGGCGCCTGTTTGACCGCCAGATTCGAGGCCCGGGCCCTGGCGCGCGGGATCTTGCCGCGGAAAATCTCGCGCCC                                                                          >  2:2869126/1‑101 (MQ=255)
                                                         CGGCAGGCGCCTGTTTGACCGCCAGATTCGAGGCCCGGGCACTGGCGCGCGGGATCTTGCCGCGGAAAATCTCGCGCCCGCCGGCGACGACGCGCGGAATC                                                    <  1:2869342/101‑1 (MQ=255)
                                                                                                                                                                                                                
CGGCTATTCGACCTATCGCGGCAGTTGAGCCGGATCAGAAATCTTCCCAGTTGTCCTCGGCAGGCGCCTGTTTGACCGCCAGATTCGAGGCCCGGGCACTGGCGCGCGG...................................................................................................  <  NC_014034/2800592‑2800484
....................................................................................................GGCGCGCGGGATCTTGCCGCGGAAAATCTCGCGCCCGCCGGCGACGACGCGCGGAATCACCCCCAGCCCGGTCAGCACCCTTGCCCCGCCCGAGCCCCGGGTCACCCC  >  NC_014034/3610969‑3611067

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 21 ≤  ATCG  < 29 ≤  ATCG  < 39 ≤  ATCG