New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2814570 =195 (0.880)2 (0.010) 2/186 37.3 0.01 coding (823/2292 nt) RCAP_rcc02623 hypothetical protein
?NC_014034 3639305 = 207 (0.870)coding (151/936 nt) RCAP_rcc03437 OmpA/MotB domain‑containing protein
Rejected: Position hash score below cutoff.

CCGCTTCACCGGCACGCTGATCATGCCGACCGCGGCGCGGCTGGTGCTGCAGAAGAATTTCGACTTTCCGACCTATGCGAAGGCCTTCGGCGACGAGGAACTGGCGC...................................................................................................  <  NC_014034/2814676‑2814570
....................................................................................................CTGGCGCGCGGACACGATGGCGCGCAGCGCGCTGGAAGGGGCGCGGTCCGACACGGCCTGGCGGCTGCGCGGCAATCAGCAGACGACGCTGCAAATCCTGGCGCCG  >  NC_014034/3639305‑3639403
                                                                                                                                                                                                              
                           GACCGCGGCGCGGCTGGTGCTGCAGAAGAATTTCGACTTTCCGACCTATGCGAAGGCCTTCGGCGACGAGGAACTGGCGCGCGGACACGATGGCGCGCAGC                                                                                >  2:2430237/1‑101 (MQ=255)
                                                             GACTTTCCGACCTATGCGAAGGCCTTCGGCGACGAGGAACTGGCGCGCGGACACGATGGCGCGCAGCGCGCTGGAAGGGGCGCGGTCCGACACGGCCTGGC                                              <  1:2430402/101‑1 (MQ=255)
                                                                                                                                                                                                              
CCGCTTCACCGGCACGCTGATCATGCCGACCGCGGCGCGGCTGGTGCTGCAGAAGAATTTCGACTTTCCGACCTATGCGAAGGCCTTCGGCGACGAGGAACTGGCGC...................................................................................................  <  NC_014034/2814676‑2814570
....................................................................................................CTGGCGCGCGGACACGATGGCGCGCAGCGCGCTGGAAGGGGCGCGGTCCGACACGGCCTGGCGGCTGCGCGGCAATCAGCAGACGACGCTGCAAATCCTGGCGCCG  >  NC_014034/3639305‑3639403

Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG