| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_014034 | = 2818055 | 213 (0.920) | 3 (0.010) | 2/194 | 38.2 | 0.01 | intergenic (+292/‑47) | RCAP_rcc02625/RCAP_rcc02626 | hypothetical protein/hypothetical protein |
| ? | NC_014034 | 2818077 = | 226 (0.950) | intergenic (+314/‑25) | RCAP_rcc02625/RCAP_rcc02626 | hypothetical protein/hypothetical protein | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
CCGGGAAGGGGCAGCAGGCGCCCGAGCCGCAAGCCAGGAGACCTGCCAGGCCAAAGACCATCCCGGGCGGCGGGCCCGGAGGCATGGACCCCGCTTGCGCGG.................................................................................................... > NC_014034/2817954‑2818055
...................................................................................................CGGCCCGACACAACGGAGCGGCCAGGCCATGGAACCGAAAGACACGACAACGAACACCGCCTTCAAGGGCTACACGAACAGCACCTGCCCGTTCCTGCCCTGC > NC_014034/2818077‑2818176
AAGACCATCCCGGGCGGCGGGCCCGGAGGCATGGACCCCGCTTGCGCGGCCCGACACAACGGAGCGGCCAGGCCATGGAACCGAAAGACACGACAACGAAC > 2:3915234/1‑101 (MQ=255)
GACCACCCCGGGCGGCGGGCCCGGAGGCATGGCCCCCGCTTGCGCGGCCCGACACAACGGAGCGGCCAGGCCATGGAACCGAAAGACACGACAACGAACAC < 1:3915519/101‑1 (MQ=255)
gccCGCGGCCCGACACAACGGAGCGGCCAGGCCATGGAACCGAAAGACACGACAACGAACACCGCCTTCAAGGGCTACACGAACAGCACCTGCCCGTTCCT < 1:1721737/98‑1 (MQ=255)
CCGGGAAGGGGCAGCAGGCGCCCGAGCCGCAAGCCAGGAGACCTGCCAGGCCAAAGACCATCCCGGGCGGCGGGCCCGGAGGCATGGACCCCGCTTGCGCGG.................................................................................................... > NC_014034/2817954‑2818055
...................................................................................................CGGCCCGACACAACGGAGCGGCCAGGCCATGGAACCGAAAGACACGACAACGAACACCGCCTTCAAGGGCTACACGAACAGCACCTGCCCGTTCCTGCCCTGC > NC_014034/2818077‑2818176
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 25 ≤
ATCG
< 32 ≤
ATCG
< 41 ≤
ATCG
|