New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 283661 =225 (1.060)2 (0.010) 2/178 36.5 0.01 coding (572/864 nt) RCAP_rcc00248 hypothetical protein
?NC_014034 1203648 = 215 (0.910)coding (481/501 nt) RCAP_rcc01131 MarR family transcriptional regulator
Rejected: Position hash score below cutoff.

CGCCGCGGCTCTGGCGCTGTCGATCGCCACGCTCTCGGTGCGGGGCGCGTCTTCGGGCGGCAATGTGCTGATGATCGTCGGCCTGCAGATGCTGGTGGGGGCCGCGGTGCT....................................................................................................  <  NC_014034/283771‑283661
....................................................................................................GCCGCGGTGCTTTTTCTTCGCCTTCTTCTCGGCGGCCATGCCCTGCATCAGCTCGGTCAGATCGCGGCGCATCAGCTTTGAAAACCACTGCGAGGCCGCCCCGGCCATCTC  >  NC_014034/1203648‑1203747
                                                                                                                                                                                                                   
                                                   TTCGGGCGGCAATGTGCTGATGATCGTCGGCCTGCAGATGCTGGTGGGGGCCGCGGTGCTTTTTCTTCGCCTTCTTCTCGGCGGCCATGCCCTGCATCAGC                                                             >  2:2796672/1‑101 (MQ=255)
                                                    TCGGGCGGCAATGTGCTGATGATCGTCGGCCTGCAGATGCTGGTGGGGGCCGCGGTGCTTTTTCTTCGCCTTCTTCTCGGCGGCCATGCCCTGCATCAGCT                                                            <  1:2796888/101‑1 (MQ=255)
                                                                                                                                                                                                                   
CGCCGCGGCTCTGGCGCTGTCGATCGCCACGCTCTCGGTGCGGGGCGCGTCTTCGGGCGGCAATGTGCTGATGATCGTCGGCCTGCAGATGCTGGTGGGGGCCGCGGTGCT....................................................................................................  <  NC_014034/283771‑283661
....................................................................................................GCCGCGGTGCTTTTTCTTCGCCTTCTTCTCGGCGGCCATGCCCTGCATCAGCTCGGTCAGATCGCGGCGCATCAGCTTTGAAAACCACTGCGAGGCCGCCCCGGCCATCTC  >  NC_014034/1203648‑1203747

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 40 ≤  ATCG