New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2969768200 (0.930)2 (0.010) 2/182 36.9 0.01 coding (1104/1185 nt) RCAP_rcc02782 DegT/DnrJ/EryC1/StrS family aminotransferase
?NC_014034 3271756 = 222 (0.930)coding (748/1137 nt) RCAP_rcc03078 polysaccharide biosynthesis/export family protein
Rejected: Position hash score below cutoff.

CGGGCTTTCGCCGGACAATGCCCGCGCCTTCTGGAACTGGCAGTTCCTGGGCGAACAGCCCGATCTGCCGAAGACCCGGGCGATGCTGATGCGCGCCTGCGACACCCGC....................................................................................................  >  NC_014034/2969660‑2969768
....................................................................................................GACACCCGCGCCTTCACCTCGCTTGGCGCCACCGGCGCGCAGGCGCGCGTGCCCTTCGAAACGCAGACGCTCTCCGCGCTCGAGGCCATCGCCACCGTGGGCGGGCTGT  >  NC_014034/3271756‑3271855
                                                                                                                                                                                                                 
                                   tCTGGCAGTTCCTGGGCGAACAGCCCGATCTGCCGAAGACCCGGGCGATGCTGATGCGCGCCTGCGACACCCGCGCCTTCACCTCGCTTGGCGCCACCGGC                                                                           <  2:4448232/100‑1 (MQ=255)
                                    CTGGCAGTTCCTGGGCGAACAGCCCGATCTGCCGAAGACCCGGGCGATGCTGATGCGCGCCTGCGACACCCGCGCCTTCACCTCGCTTGGCGCCACCGGCa                                                                          >  1:4448527/1‑100 (MQ=255)
                                                                                                                                                                                                                 
CGGGCTTTCGCCGGACAATGCCCGCGCCTTCTGGAACTGGCAGTTCCTGGGCGAACAGCCCGATCTGCCGAAGACCCGGGCGATGCTGATGCGCGCCTGCGACACCCGC....................................................................................................  >  NC_014034/2969660‑2969768
....................................................................................................GACACCCGCGCCTTCACCTCGCTTGGCGCCACCGGCGCGCAGGCGCGCGTGCCCTTCGAAACGCAGACGCTCTCCGCGCTCGAGGCCATCGCCACCGTGGGCGGGCTGT  >  NC_014034/3271756‑3271855

Base quality scores:  ATCG  < 3 ≤  ATCG  < 19 ≤  ATCG  < 26 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG