New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 297179 =222 (1.040)2 (0.010) 2/180 36.7 0.01 coding (697/951 nt) RCAP_rcc00259 porin family protein
?NC_014034 = 1952649 213 (0.900)coding (391/558 nt) RCAP_rcc01807 hypothetical protein
Rejected: Position hash score below cutoff.

GCGACGAAGTCGACTTTTTGCACGTAGCCTTTGACGGTGGTCGCGCCGAAGGCCGAGGCAACGCTCAGGCCGATCGCGTCGTCAACCGGGTTTTCGTCGCCGCCGATGGC....................................................................................................  <  NC_014034/297288‑297179
....................................................................................................CGCCGATGGCTGGGAACTGGGCGCCGATGCCCGCTACGCCCTGCCCGATGGCGGCGCCGCGATCGGCACCGACACCACCACGACGCTCGCGCCGGTGGTGGTGCAGGTCT  <  NC_014034/1952649‑1952550
                                                                                                                                                                                                                  
                                   GGTGGTCGCGCCGAAGGCCGAGGCAACGCTCAGGCCGATCGCGTCGTCAACCGGGTTTTCGTCGCCGCCGATGGCTGGGAACTGGGCGCCGATGCCCGCTA                                                                            >  1:3273933/1‑101 (MQ=255)
                                                               CTCAGGCCGATCGCGTCGTCAACCGGGTTTTCGTCGCCGCCGATGGCTGGGAACTGGGCGCCGATGCCCGCTACGCCCTGCCCGATGGCGGCGCCGCGATC                                                <  2:3273688/101‑1 (MQ=255)
                                                                                                                                                                                                                  
GCGACGAAGTCGACTTTTTGCACGTAGCCTTTGACGGTGGTCGCGCCGAAGGCCGAGGCAACGCTCAGGCCGATCGCGTCGTCAACCGGGTTTTCGTCGCCGCCGATGGC....................................................................................................  <  NC_014034/297288‑297179
....................................................................................................CGCCGATGGCTGGGAACTGGGCGCCGATGCCCGCTACGCCCTGCCCGATGGCGGCGCCGCGATCGGCACCGACACCACCACGACGCTCGCGCCGGTGGTGGTGCAGGTCT  <  NC_014034/1952649‑1952550

Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 32 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG