New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 303211190 (0.890)2 (0.010) 2/180 36.7 0.01 coding (985/1854 nt) mutL DNA mismatch repair protein MutL
?NC_014034 2705481 = 190 (0.800)coding (390/2049 nt) RCAP_rcc02519 diguanylate cyclase/phosphodiesterase
Rejected: Position hash score below cutoff.

GGCTGCATCGCGCCCAGAGTGGCGGTGGCGACGGTGGAGGAGGACCGATGCCCCGATTGCGCCAGCGCGTGGCGGATGCCGGTCACGATCAGGCCCCGCGGCACGCCCGC....................................................................................................  >  NC_014034/303102‑303211
....................................................................................................GCACGCCCGCCCGCGCCTGATCCTGATCGCGCTGATGCGCCCGCGCCGCGTCGAACAGCACGAAGCCGATCCGGCCCGCCTCGGACGAGAGCTGCGCGCTGAGCAGGCAA  >  NC_014034/2705481‑2705580
                                                                                                                                                                                                                  
                                                              CAGCGCGTGGCGGATGCCGGTCACGATCAGGCCCCGCGGCACGCCCGCCCGCGCCTGATCCTGATCGCGCTGATGCGCCCGCGCCGCGTCGAACAGCACGA                                                 >  2:1714788/1‑101 (MQ=255)
                                                                             GCCGGTCACGATCAGGCCCCGCGGCACGCCCGCCCGCGCCTGATCCTGATCGCGCTGATGCGCCCGCGCCGCGTCGAACAGCACGAAGCCGATCCGGCCCG                                  <  1:1714899/101‑1 (MQ=255)
                                                                                                                                                                                                                  
GGCTGCATCGCGCCCAGAGTGGCGGTGGCGACGGTGGAGGAGGACCGATGCCCCGATTGCGCCAGCGCGTGGCGGATGCCGGTCACGATCAGGCCCCGCGGCACGCCCGC....................................................................................................  >  NC_014034/303102‑303211
....................................................................................................GCACGCCCGCCCGCGCCTGATCCTGATCGCGCTGATGCGCCCGCGCCGCGTCGAACAGCACGAAGCCGATCCGGCCCGCCTCGGACGAGAGCTGCGCGCTGAGCAGGCAA  >  NC_014034/2705481‑2705580

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG