New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 3553897	217 (0.930)	2 (0.010)	2/196	38.4	0.01	coding (854/897 nt)	RCAP_rcc03357	hypothetical protein
	?	NC_014034	= 3596771	206 (0.870)					coding (1722/1737 nt)	RCAP_rcc03391	type I secretion system ATPase
Rejected: Position hash score below cutoff.

CCAGGGCACGGGAAAGGAGAGCGAAGCCCTTGCAATGGCTTGGGAAACCGCCGCCGTCCGGCCCCCTCACCGCGAAGCCGCCGTGCCGGGGGAGGTCGCCCC....................................................................................................  >  NC_014034/3553796‑3553897 ....................................................................................................CCCGGTCCGGCGCCGCGGCTCAGATCGGCGGCATTCTGCACCATCGCTTTCAACACGTCCTCGCGCGGGCCGAACGCCCGCCGCATCCCGGCTTCCAGCACC  <  NC_014034/3596771‑3596672                                                                                                                                                                                                                                             AATGGCTTGGGAAACCGCCGCCGTCCGGCCCCCTCACCGCGAAGCCGCCGTGCCGGGGGAGGTCG.CCCCGGTCCGGCGCCGCGGCTCAGATCGGCGGGATT                                                                     >  1:133649/1‑101 (MQ=255)                                                                     cCCGCGAAGCCGCCGTGCCGGGGGAGGTCG.CCCCGGTCCGGCGCCGCGGCTCAGATCGGCGGCATTCTGCACCATCGCTTTCAACACGTCCTCGCGCGGGC                                  <  2:133635/100‑1 (MQ=255)                                                                                                                                                                                                            CCAGGGCACGGGAAAGGAGAGCGAAGCCCTTGCAATGGCTTGGGAAACCGCCGCCGTCCGGCCCCCTCACCGCGAAGCCGCCGTGCCGGGGGAGGTCGCCCC....................................................................................................  >  NC_014034/3553796‑3553897 ....................................................................................................CCCGGTCCGGCGCCGCGGCTCAGATCGGCGGCATTCTGCACCATCGCTTTCAACACGTCCTCGCGCGGGCCGAACGCCCGCCGCATCCCGGCTTCCAGCACC  <  NC_014034/3596771‑3596672 Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG