New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	3554277 =	251 (1.190)	2 (0.010)	2/178	36.5	0.01	intergenic (+337/‑3)	RCAP_rcc03357/RCAP_rcc03358	hypothetical protein/TonB‑dependent receptor
	?	NC_014034	3571008 =	216 (0.910)					coding (975/1185 nt)	ackA3	acetate kinase
Rejected: Position hash score below cutoff.

GGTGACGGAAATCGTGTCCAGATCGGTGATCTCCTCCTGCGCCAGCGCGGGGGCGGCGGCAGAGGCGAAAGCGGCAGAGAGCAGGGCAAGACGCGACAGAGGCGGCATCGG....................................................................................................  <  NC_014034/3554387‑3554277 ....................................................................................................GGCGGCATCGGCGAAAACTCGCGGCTGATCCGCGAGCGGATCTGCGAAAGGCTGGGCTGGATGGGGATCGAGATCGACCACCTCCGCAACAGCGCAAACGCGACGGTGATT  >  NC_014034/3571008‑3571107                                                                                                                                                                                                                                                                  CGCGGGGGCGGCGGCAGAGGCGAAAGCGGCAGAGAGCAGGGCAAGACGCGACAGAGGCGGCATCGGCGAAAACTCGCGGCTGATCCGCGAGCGGATCTGCG                                                                   >  2:3960323/1‑101 (MQ=255)                                                                         GGCAGAGAGCAGGGCAAGACGCGACAGAGGCGGCATCGGCGAAAACTCGCGGCTGATCCGCGAGCGGATCTGCGAAAGGCTGGGCTGGATGGGGATCGAGA                                        <  1:3960608/101‑1 (MQ=255)                                                                                                                                                                                                                     GGTGACGGAAATCGTGTCCAGATCGGTGATCTCCTCCTGCGCCAGCGCGGGGGCGGCGGCAGAGGCGAAAGCGGCAGAGAGCAGGGCAAGACGCGACAGAGGCGGCATCGG....................................................................................................  <  NC_014034/3554387‑3554277 ....................................................................................................GGCGGCATCGGCGAAAACTCGCGGCTGATCCGCGAGCGGATCTGCGAAAGGCTGGGCTGGATGGGGATCGAGATCGACCACCTCCGCAACAGCGCAAACGCGACGGTGATT  >  NC_014034/3571008‑3571107 Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG