New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 356214 =236 (1.020)2 (0.010) 2/194 38.2 0.01 coding (750/1017 nt) rpoA DNA‑directed RNA polymerase subunit alpha
?NC_014034 1408209 = 273 (1.150)coding (518/909 nt) RCAP_rcc01317 pirin domain‑containing protein
Rejected: Position hash score below cutoff.

CTGGATCAGATCGCCGATATAGACGATGTTGTCGTTCTTCAGGCAGTTCGCCGAACGGACCGACAGTTCCAGCTCGTCCACTTTCTTCAGCAGCAGCGGGTTG....................................................................................................  <  NC_014034/356316‑356214
....................................................................................................TTGGCAGCGATCCCGTCGACCGGGCCTGTCTTGCCCCAGAACGTGCCGATGATGACCTTGACGGTGGTGCCATCGTCGTCTCCCTCGACGGGGATGTCGCCCG  >  NC_014034/1408209‑1408308
                                                                                                                                                                                                           
                                                     AACGGACCGACAGTTCCAGCTCGTCCACTTTCTTCAGCAGCAGCGGGTTGGCAGCGATCCCGTCGACCGGGCCTGTCTTGCCCCAGAACGTGCCGATGATG                                                   >  2:1278010/1‑101 (MQ=255)
                                                                 GTTCCAGCTCGTCCACTTTCTTCAGCAGCAGCGGGTTGGCAGCGATCCCGTCGACCGGGCCTGTCTTGCCCCAGAACGTGCCGATGATGACCTTGACGGTG                                       <  1:1278103/101‑1 (MQ=255)
                                                                                                                                                                                                           
CTGGATCAGATCGCCGATATAGACGATGTTGTCGTTCTTCAGGCAGTTCGCCGAACGGACCGACAGTTCCAGCTCGTCCACTTTCTTCAGCAGCAGCGGGTTG....................................................................................................  <  NC_014034/356316‑356214
....................................................................................................TTGGCAGCGATCCCGTCGACCGGGCCTGTCTTGCCCCAGAACGTGCCGATGATGACCTTGACGGTGGTGCCATCGTCGTCTCCCTCGACGGGGATGTCGCCCG  >  NC_014034/1408209‑1408308

Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG