New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 371992274 (1.270)2 (0.010) 2/182 36.9 0.01 coding (1679/1848 nt) oxaA inner membrane protein OxaA
?NC_014034 2633500 = 213 (0.900)coding (1057/1389 nt) RCAP_rcc02455 FAD dependent oxidoreductase
Rejected: Position hash score below cutoff.

AGGTCAGGCCGTTTGCCGTGCAGCGACATGATCGAATATTGCTGGATGAAGGTGATCACGTTGTTGGCGATCCAGTAGAGCACCAGCCCCGAGGCGAAGCCGCCCAGCA....................................................................................................  >  NC_014034/371884‑371992
....................................................................................................CGCCCAGCACGCCGCACCAGGCATGATCCAGCCGCAGCCCCCGCACCTGCGGCAGCATGCGATAGAGGATCTCGGTCAGCTTCGCGATCGTCGCGGCCTGGGTCTGCCC  >  NC_014034/2633500‑2633599
                                                                                                                                                                                                                 
                                         CTGGATGAAGGTGATCACGTTGTTGGCGATCCAGTAGAGCACCAGCCCCGAGGCGAAGCCGCCCAGCACGCCGCACCAGGCATGATCCAGCCGCAGCCCCC                                                                     >  2:1177241/1‑101 (MQ=255)
                                                                TGGCGATCCAGTAGAGCACCAGCCCCGAGGCGAAGCCGCCCAGCACGCCGCACCAGGCATGATCCAGCCGCAGCCCCCGCACCTGCGGCAGCATGCGATAG                                              <  1:1177333/101‑1 (MQ=255)
                                                                                                                                                                                                                 
AGGTCAGGCCGTTTGCCGTGCAGCGACATGATCGAATATTGCTGGATGAAGGTGATCACGTTGTTGGCGATCCAGTAGAGCACCAGCCCCGAGGCGAAGCCGCCCAGCA....................................................................................................  >  NC_014034/371884‑371992
....................................................................................................CGCCCAGCACGCCGCACCAGGCATGATCCAGCCGCAGCCCCCGCACCTGCGGCAGCATGCGATAGAGGATCTCGGTCAGCTTCGCGATCGTCGCGGCCTGGGTCTGCCC  >  NC_014034/2633500‑2633599

Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG