New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 408498 =19 (0.110)93 (0.530) 29/148 14.1 0.62 intergenic (+116/+32) glnA1/dapA glutamine synthetase/dihydrodipicolinate synthase
?NC_014034 = 1748566 96 (0.400)intergenic (‑270/‑128) RCAP_rcc01616/gppA hypothetical protein/guanosine‑5'‑triphosphate,3'‑diphosphate pyrophosphatase
Rejected: Position hash score below cutoff.

Only 100 of 152 total aligned reads displayed.

TGACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGC..................................................................  <  NC_014034/408597‑408498
..............................................................................................................................GCCTCCCCCCGGGATATTTGAGGCAAGATGAAGGGGCACC  <  NC_014034/1748566‑1748527
                                                                                                    ||||||||||||||||||||||||||                                        
TGACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCT                                                                   >  1:3134548/1‑101 (MQ=1)
 GACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTC                                                                  >  2:845709/1‑101 (MQ=1)
  ACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCT                                                                 <  2:1329257/101‑1 (MQ=1)
    CGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGC                                                               <  2:4064743/101‑1 (MQ=1)
     GAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGCCCTGTGCGGGGGGCTCTGCC                                                              >  2:2101922/1‑101 (MQ=1)
      AACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCC                                                             <  1:1300123/101‑1 (MQ=1)
      AACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCC                                                             >  1:1938478/1‑101 (MQ=1)
      AACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCC                                                             <  1:61748/101‑1 (MQ=1)
       ACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCC                                                            <  1:4170288/101‑1 (MQ=1)
       ACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCC                                                            >  1:4270616/1‑101 (MQ=1)
       ACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCC                                                            >  1:4568843/1‑101 (MQ=1)
        CTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCC                                                           <  1:3608506/101‑1 (MQ=1)
        CTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCC                                                           >  2:3139560/1‑101 (MQ=1)
         TGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTTCGGGGGGCTCTGCCCCCC                                                          <  2:243763/101‑1 (MQ=1)
          GACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCG                                                         <  1:663305/101‑1 (MQ=1)
          GACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCG                                                         <  1:4658439/101‑1 (MQ=1)
          GACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCG                                                         <  1:2133855/101‑1 (MQ=1)
           ACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGT                                                        <  1:538531/101‑1 (MQ=1)
           ACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGT                                                        <  2:4010357/101‑1 (MQ=1)
              GACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGTGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTT                                                     <  2:4034118/101‑1 (MQ=1)
              GACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTT                                                     <  1:3000569/101‑1 (MQ=1)
               ACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTG                                                    <  2:1593244/101‑1 (MQ=1)
                CGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGC                                                   <  1:948916/101‑1 (MQ=1)
                CGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGC                                                   >  2:3639827/1‑101 (MQ=1)
                CGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGC                                                   <  1:1734960/101‑1 (MQ=1)
                 GGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCT                                                  <  1:3640095/101‑1 (MQ=1)
                  GGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTT                                                 <  2:701418/101‑1 (MQ=1)
                   gtccgAGGCCGCGCTTGACGCCGCGATGCAACTCGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTT                                                <  1:675529/96‑1 (MQ=0)
                   GACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTT                                                <  2:1494485/101‑1 (MQ=1)
                   GACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTT                                                <  2:1464071/101‑1 (MQ=1)
                    ACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTC                                               <  2:1364903/101‑1 (MQ=1)
                    ACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTC                                               <  1:2410003/101‑1 (MQ=1)
                      CAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGGTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAG                                             <  1:3246114/101‑1 (MQ=1)
                      CAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAG                                             <  1:3713826/101‑1 (MQ=1)
                      CAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAG                                             <  1:3744214/101‑1 (MQ=1)
                       AAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGC                                            <  2:1046373/101‑1 (MQ=1)
                        AGGCCGCGCTTGACGCCNCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCA                                           <  2:104067/101‑1 (MQ=1)
                        AGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCA                                           <  2:2817793/101‑1 (MQ=1)
                        AGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCA                                           >  1:2774023/1‑101 (MQ=1)
                          GCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAG                                         <  1:609187/101‑1 (MQ=1)
                          GCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCCGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAG                                         <  1:3571835/101‑1 (MQ=1)
                           cctctCTTGACGCCGCTATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGC                                        <  2:264864/96‑1 (MQ=0)
                             GCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCT                                      <  2:2613460/101‑1 (MQ=1)
                             GCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCT                                      <  2:1304473/101‑1 (MQ=1)
                              CGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTC                                     >  2:1930439/1‑101 (MQ=1)
                              CGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTC                                     <  2:4294398/101‑1 (MQ=1)
                               GCTTGACGCCGCGAGGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCC                                    <  1:1019174/101‑1 (MQ=1)
                                 TTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCC                                  <  2:2269536/101‑1 (MQ=1)
                                 TTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCC                                  <  1:220476/101‑1 (MQ=1)
                                  TGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCC                                 <  1:2126809/101‑1 (MQ=1)
                                   GACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCC                                <  1:2616540/101‑1 (MQ=1)
                                   GACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCC                                <  2:3346193/101‑1 (MQ=1)
                                   GACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCC                                <  2:4220298/101‑1 (MQ=1)
                                   GACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCC                                <  2:3254146/101‑1 (MQ=1)
                                   GACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCC                                <  2:544094/101‑1 (MQ=1)
                                   GACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCC                                <  2:2397515/101‑1 (MQ=1)
                                    ACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCG                               <  2:600178/101‑1 (MQ=1)
                                     CGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGG                              <  2:1922394/101‑1 (MQ=1)
                                      GCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGG                             <  1:3364270/101‑1 (MQ=1)
                                       CCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGA                            <  1:2634950/101‑1 (MQ=1)
                                         GCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATA                          <  2:3566215/101‑1 (MQ=1)
                                         GCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATA                          <  1:4292572/101‑1 (MQ=1)
                                          CGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATAT                         <  2:3408732/101‑1 (MQ=1)
                                           GATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATT                        <  2:1694189/101‑1 (MQ=1)
                                           GATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATT                        >  2:2777609/1‑101 (MQ=1)
                                            ATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTT                       <  1:2365403/101‑1 (MQ=1)
                                            ATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTT                       <  1:4441865/101‑1 (MQ=1)
                                            ATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTT                       <  1:2987627/101‑1 (MQ=1)
                                             TGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTG                      <  1:3192378/101‑1 (MQ=1)
                                             TGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTG                      <  2:4633618/101‑1 (MQ=1)
                                             TGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTG                      >  2:125412/1‑101 (MQ=1)
                                              GCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGc                     >  2:1137399/1‑100 (MQ=11)
                                              GCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGc                     <  1:3106928/101‑2 (MQ=11)
                                               CAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGcg                    <  2:1826721/101‑3 (MQ=31)
                                                 ACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGC                  >  1:1794525/1‑101 (MQ=32)
                                                  CACGCCGGGCTGATCTGAGTTCGGTCCTTTTGGCGGCCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCA                 <  2:523948/101‑1 (MQ=12)
                                                  CACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGCGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCA                 <  1:3921440/101‑1 (MQ=17)
                                                    CGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAG               <  2:1147166/101‑1 (MQ=32)
                                                    CGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAG               <  2:2230083/101‑1 (MQ=32)
                                                    CGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAG               >  1:1386509/1‑101 (MQ=32)
                                                     GCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGA              <  2:4368198/101‑1 (MQ=32)
                                                     GCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGA              <  2:4056323/101‑1 (MQ=32)
                                                      CCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGAT             <  1:2837731/101‑1 (MQ=32)
                                                      CCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGAT             <  1:1240321/101‑1 (MQ=32)
                                                       CGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATACTTGCGGCAAGATG            >  1:575846/1‑101 (MQ=14)
                                                        GGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTTGGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGA           <  1:4010994/101‑1 (MQ=2)
                                                        GGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGA           <  1:3182280/101‑1 (MQ=11)
                                                         GGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAA          <  2:3064905/101‑1 (MQ=1)
                                                          GCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAG         <  1:4389455/101‑1 (MQ=1)
                                                          GCTGATCTGAGGTCGGTCCTTTTGGCGACCTGGGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAG         <  1:980560/101‑1 (MQ=0)
                                                           CTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATCTGCGGCAAGATGAAGG        <  1:4075084/101‑1 (MQ=2)
                                                            TGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGa       >  1:4497985/1‑100 (MQ=1)
                                                             GATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGac      >  1:782967/1‑99 (MQ=1)
                                                              ATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGaca     <  2:3424927/101‑4 (MQ=11)
                                                              ATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGaca     <  1:2399792/101‑4 (MQ=11)
                                                               TCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGacat    <  2:1563419/101‑5 (MQ=14)
                                                               TCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGacat    <  2:1393356/101‑5 (MQ=14)
                                                                CTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGacatc   <  2:1385529/101‑6 (MQ=17)
                                                                 TGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGacatcg  >  1:4506164/1‑95 (MQ=18)
                                                                 TGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAGGacatcg  <  1:100880/101‑7 (MQ=18)
                                                                                                    ||||||||||||||||||||||||||                                        
TGACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGC..................................................................  <  NC_014034/408597‑408498
..............................................................................................................................GCCTCCCCCCGGGATATTTGAGGCAAGATGAAGGGGCACC  <  NC_014034/1748566‑1748527

Base quality scores:  ATCG  < 3 ≤  ATCG  < 21 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 39 ≤  ATCG