New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 408498 =24 (0.140)87 (0.510) 24/144 15.8 0.50 intergenic (+116/+32) glnA1/dapA glutamine synthetase/dihydrodipicolinate synthase
?NC_014034 = 925885 150 (0.630)intergenic (+138/+36) RCAP_rcc00838/glcB DnaJ domain‑containing protein/malate synthase
Rejected: Position hash score below cutoff.

Only 100 of 150 total aligned reads displayed.

TGACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGC..................................................................  <  NC_014034/408597‑408498
................................................................................................................................CTCCCCCCGGGATATTTGGGGCAAGATGAAAGGGCAAA  <  NC_014034/925885‑925848
                                                                                                    ||||||||||||||||||||||||||||                                      
 GACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTC                                                                  >  2:845709/1‑101 (MQ=1)
  ACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCT                                                                 <  1:2851247/101‑1 (MQ=1)
   CCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTG                                                                <  2:800198/101‑1 (MQ=1)
    CGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGC                                                               <  2:4049237/101‑1 (MQ=1)
      AACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCC                                                             <  1:61748/101‑1 (MQ=1)
      AACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCC                                                             >  1:1938478/1‑101 (MQ=1)
      AACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCC                                                             <  1:1300123/101‑1 (MQ=1)
       ACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCC                                                            <  1:4170288/101‑1 (MQ=1)
       ACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCC                                                            >  1:4270616/1‑101 (MQ=1)
       ACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCC                                                            >  1:4568843/1‑101 (MQ=1)
        CTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCC                                                           <  1:3608506/101‑1 (MQ=1)
         TGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCC                                                          <  1:3168180/101‑1 (MQ=1)
          GACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCG                                                         <  1:4658439/101‑1 (MQ=1)
          GACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCG                                                         <  1:2133855/101‑1 (MQ=1)
          GACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCG                                                         <  1:663305/101‑1 (MQ=1)
           ACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGT                                                        <  2:4010357/101‑1 (MQ=1)
           ACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGT                                                        <  1:538531/101‑1 (MQ=1)
            CCGGCGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGGCCTGTGCGGGGGGCTCTGCCCCCCGTC                                                       <  2:2241108/101‑1 (MQ=0)
             CGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCT                                                      <  2:2026314/101‑1 (MQ=1)
             CGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCT                                                      <  2:1916897/101‑1 (MQ=1)
               ACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTG                                                    <  2:1593244/101‑1 (MQ=1)
                CGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGC                                                   <  1:1734960/101‑1 (MQ=1)
                 GGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCT                                                  <  1:3640095/101‑1 (MQ=1)
                   gtccgAGGCCGCGCTTGACGCCGCGATGCAACTCGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTT                                                <  1:675529/96‑1 (MQ=0)
                   GACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTT                                                <  2:1494485/101‑1 (MQ=1)
                    ACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTC                                               <  1:2410003/101‑1 (MQ=1)
                    ACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTC                                               <  2:1364903/101‑1 (MQ=1)
                      CAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGGTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAG                                             <  1:3246114/101‑1 (MQ=1)
                      CAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAG                                             <  1:3713826/101‑1 (MQ=1)
                      CAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAG                                             <  1:3744214/101‑1 (MQ=1)
                       AAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGC                                            <  2:1046373/101‑1 (MQ=1)
                       AAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCGGAGGTCGGTCCTTTTGGCGACCTGTGGGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGC                                            <  1:902969/101‑1 (MQ=0)
                        AGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCA                                           <  2:1310908/101‑1 (MQ=1)
                        AGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCA                                           <  1:1048528/101‑1 (MQ=1)
                        AGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCA                                           >  1:2774023/1‑101 (MQ=1)
                        AGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCA                                           <  1:1767245/101‑1 (MQ=1)
                         GGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAA                                          <  1:2195610/101‑1 (MQ=1)
                          GCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAG                                         <  1:609187/101‑1 (MQ=1)
                          GCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCCGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAG                                         <  1:3571835/101‑1 (MQ=1)
                            CGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCC                                       >  2:4337392/1‑101 (MQ=1)
                             GCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCT                                      <  2:1304473/101‑1 (MQ=1)
                             GCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCT                                      <  2:2613460/101‑1 (MQ=1)
                             GCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCT                                      >  1:206225/1‑101 (MQ=1)
                              CGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTC                                     >  2:1930439/1‑101 (MQ=1)
                              CGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTC                                     <  2:3147678/101‑1 (MQ=1)
                              CGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTC                                     <  1:2392474/101‑1 (MQ=1)
                               GCTTGACGCCGCGAGGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCC                                    <  1:1019174/101‑1 (MQ=1)
                                 TTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCC                                  >  2:2405812/1‑101 (MQ=1)
                                 TTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTGTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCC                                  <  2:563154/101‑1 (MQ=1)
                                  TGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCC                                 <  2:1001673/101‑1 (MQ=1)
                                   GACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCC                                <  2:2397515/101‑1 (MQ=1)
                                   GACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCC                                <  2:1134767/101‑1 (MQ=1)
                                   GACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCC                                <  2:1253382/101‑1 (MQ=1)
                                   GACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCC                                <  2:4220298/101‑1 (MQ=1)
                                   GACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCC                                <  2:3346193/101‑1 (MQ=1)
                                   GACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCC                                <  2:3254146/101‑1 (MQ=1)
                                    ACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCG                               <  2:600178/101‑1 (MQ=1)
                                    ACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCG                               <  2:4086725/101‑1 (MQ=1)
                                      GCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGG                             >  2:3049990/1‑101 (MQ=1)
                                      GCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGG                             <  1:3364270/101‑1 (MQ=1)
                                      GCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGG                             >  2:3520928/1‑101 (MQ=1)
                                       CCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGA                            <  1:2634950/101‑1 (MQ=1)
                                        CGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCACGCCTCCCCCCGGGAT                           <  2:1549128/101‑1 (MQ=1)
                                         GCGATGCAACACGCCGGGCTGATCTGNNGNNGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATA                          <  1:3045995/101‑1 (MQ=1)
                                         GCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATA                          <  1:4292572/101‑1 (MQ=1)
                                         GCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATA                          <  2:3566215/101‑1 (MQ=1)
                                          CGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATAT                         <  2:3408732/101‑1 (MQ=1)
                                           GATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGCTATT                        >  2:2528424/1‑101 (MQ=1)
                                           GATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATT                        <  2:1368927/101‑1 (MQ=1)
                                           GATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATT                        <  1:1313730/101‑1 (MQ=1)
                                           GATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATT                        >  2:2777609/1‑101 (MQ=1)
                                            ATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTT                       <  1:2365403/101‑1 (MQ=1)
                                            ATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTT                       <  1:2987627/101‑1 (MQ=1)
                                            ATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTT                       <  1:4441865/101‑1 (MQ=1)
                                            ATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTT                       <  2:3814545/101‑1 (MQ=1)
                                              GCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGc                     <  1:3106928/101‑2 (MQ=11)
                                               CAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGcg                    <  2:1826721/101‑3 (MQ=31)
                                                  CACGCCGGGCTGATCTGAGTTCGGTCCTTTTGGCGGCCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCA                 <  2:523948/101‑1 (MQ=12)
                                                  CACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGCGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCA                 <  1:3921440/101‑1 (MQ=17)
                                                   ACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAA                >  1:2609014/1‑101 (MQ=32)
                                                    CGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAG               <  2:2230083/101‑1 (MQ=32)
                                                    CGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAG               <  2:1147166/101‑1 (MQ=32)
                                                     GCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGA              <  2:4056323/101‑1 (MQ=32)
                                                     GCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGA              <  2:4368198/101‑1 (MQ=32)
                                                       CGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATACTTGCGGCAAGATG            >  1:575846/1‑101 (MQ=14)
                                                        GGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTTGGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGA           <  1:4010994/101‑1 (MQ=2)
                                                        GGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGA           <  1:3182280/101‑1 (MQ=11)
                                                         GGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAA          <  2:3064905/101‑1 (MQ=1)
                                                         GGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAA          <  2:1651569/101‑1 (MQ=1)
                                                          GCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAg         <  1:4389455/101‑2 (MQ=1)
                                                          GCTGATCTGAGGTCGGTCCTTTTGGCGACCTGGGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAg         <  1:980560/101‑2 (MQ=0)
                                                           CTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAgg        <  2:479483/101‑3 (MQ=11)
                                                           CTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATCTGCGGCAAGATGAAgg        <  1:4075084/101‑3 (MQ=2)
                                                            TGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAgga       >  1:4497985/1‑98 (MQ=1)
                                                             GATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAggac      >  1:782967/1‑97 (MQ=1)
                                                               TCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAggacat    <  2:2700486/101‑7 (MQ=14)
                                                               TCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAggacat    >  2:1406402/1‑95 (MQ=14)
                                                               TCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAggacat    <  2:1393356/101‑7 (MQ=14)
                                                                CTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAggacatc   <  1:3223216/101‑8 (MQ=17)
                                                                 TGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGCTCTGCCCCCCGTCTTGCTTTCAGCAAGCCTCCCCCCGGGATATTTGCGGCAAGATGAAggacatcg  >  1:4506164/1‑93 (MQ=18)
                                                                                                    ||||||||||||||||||||||||||||                                      
TGACCGAACTGACCGACGGGACCAAGGCCGCGCTTGACGCCGCGATGCAACACGCCGGGCTGATCTGAGGTCGGTCCTTTTGGCGACCTGTGCGGGGGGC..................................................................  <  NC_014034/408597‑408498
................................................................................................................................CTCCCCCCGGGATATTTGGGGCAAGATGAAAGGGCAAA  <  NC_014034/925885‑925848

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 39 ≤  ATCG