New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 443865 =201 (0.920)2 (0.010) 2/184 37.1 0.01 coding (771/891 nt) RCAP_rcc00416 LysR family transcriptional regulator
?NC_014034 2358929 = 217 (0.910)coding (683/1689 nt) RCAP_rcc02187 amidohydrolase
Rejected: Position hash score below cutoff.

GCCGCCGGGATCGTCGCGGCGGTCTCGGCGGGGCTGGGCGTCGCGCTGCTGTCGACGCGGCATCTGCGCCCCGAGATGGAGATCCTCGGCCCGCCCTTGCCGCCGCCG....................................................................................................  <  NC_014034/443972‑443865
....................................................................................................CGCCGCCGACAAGGCGATGATCCTGGCCGGGATGCGGCATTGCGCAAGACACGGGGTCACCAGCCTCGTCAACATGGATGGCAACCGCTACACGCTTGAATTGCTGTC  >  NC_014034/2358929‑2359028
                                                                                                                                                                                                                
                                             CTGCTGTCGACGCGGCATCTGCGCCCCGAGATGGAGATCCTCGGCCCGCCCTTGCCGCCGCCGACAAGGCGATGATCCTGGCCGGGATGCGGCATTGCGCA                                                                >  2:4308979/1‑101 (MQ=255)
                                                                        GAGATGGAGATCCTCGGCCCGCCCTTGCCGCCGCCGACAAGGCGATGATCCTGGCCGGGATGCGGCATTGCGCAAGACACGGGGTCACCAGCCTCGTCAAC                                     <  1:4309268/101‑1 (MQ=255)
                                                                                                                                                                                                                
GCCGCCGGGATCGTCGCGGCGGTCTCGGCGGGGCTGGGCGTCGCGCTGCTGTCGACGCGGCATCTGCGCCCCGAGATGGAGATCCTCGGCCCGCCCTTGCCGCCGCCG....................................................................................................  <  NC_014034/443972‑443865
....................................................................................................CGCCGCCGACAAGGCGATGATCCTGGCCGGGATGCGGCATTGCGCAAGACACGGGGTCACCAGCCTCGTCAACATGGATGGCAACCGCTACACGCTTGAATTGCTGTC  >  NC_014034/2358929‑2359028

Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG