New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 49947231 (1.060)2 (0.010) 2/184 37.1 0.01 coding (588/1002 nt) RCAP_rcc00040 aminoglycoside phosphotransferase
?NC_014034 = 275564 166 (0.700)intergenic (+86/+153) RCAP_rcc00238/ansA hypothetical protein/L‑asparaginase II
Rejected: Position hash score below cutoff.

AGGACGGCGGGCGCCACATCGCGGCGGGCGTCTTGCAGGGCCGAAACCAGATCGTAGACCGGATGGGTGGCCACCGCGTCCTGAAAATCAAGCAGTCCCAGGCGGGCG....................................................................................................  >  NC_014034/49840‑49947
....................................................................................................GGCGGGCGCTGGCCGAGGGCCTTTGGGCCCTCGGCGGTCACGGGGCTGATGTCCGGCATGGCCTCGGCGATGGCCGAGGCCAAGACAAGCCGCCTCAGATCATCTGCC  <  NC_014034/275564‑275465
                                                                                                                                                                                                                
                                             atctGATCGTAGACCGGATGGGTGGCCACCGCGTCCTGAAAATCAAGCAGTCCCAGGCGGGCGCAGGCCGAGGGCCTCTGGGCCCTCGGCGGTCACGGGGC                                                                <  2:4302717/97‑1 (MQ=0)
                                                 GATCGTAGACCGGATGGGTGGCCACCGCGTCCTGAAAATCAAGCAGTCCCAGGCGGGCGCAGGCCGAGGGCCTCTGGGCCCTCGGCGGTCACGGGGCAGAT                                                            >  1:4303006/1‑101 (MQ=0)
                                                                                                                                                                                                                
AGGACGGCGGGCGCCACATCGCGGCGGGCGTCTTGCAGGGCCGAAACCAGATCGTAGACCGGATGGGTGGCCACCGCGTCCTGAAAATCAAGCAGTCCCAGGCGGGCG....................................................................................................  >  NC_014034/49840‑49947
....................................................................................................GGCGGGCGCTGGCCGAGGGCCTTTGGGCCCTCGGCGGTCACGGGGCTGATGTCCGGCATGGCCTCGGCGATGGCCGAGGCCAAGACAAGCCGCCTCAGATCATCTGCC  <  NC_014034/275564‑275465

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 24 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG