New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 507841261 (1.220)2 (0.010) 2/180 36.7 0.01 coding (24/384 nt) RCAP_rcc00474 MerR family transcriptional regulator
?NC_014034 = 694834 233 (0.980)coding (2161/3123 nt) srfB virulence protein SrfB
Rejected: Position hash score below cutoff.

CGCGAACGTCAACCAAACTTGTAATGTGGTGGTGCAAGCTTGAACTGCCGCCTTACGTTACGCAAAGGGACAAAGGGGGCGGCAGGATGAGTGACGACATGATGACGATC....................................................................................................  >  NC_014034/507732‑507841
....................................................................................................GATGACGATCGCGCTGGACGCGGTGCTGGGCCTGACCCCCCGCCCCGAGGAGGACAGCGCAGCCGACGACAGCCCCCGCGGCCTGCCCGCGGCGCTGATCGACTATCTCG  <  NC_014034/694834‑694735
                                                                                                                                                                                                                  
                                              GCCGCCTTACGTTACGCAAAGGGACAAAGGGGGCGGCAGGATGAGTGACGACATGATGACGATCGCGCTGGACGCGGTGCTGGGCCTGACCCCCCGCCCCG                                                                 >  1:1760673/1‑101 (MQ=255)
                                                CGCCTTACGTTACGCAAAGGGACAAAGGGGGCGGCAGGATGAGTGACGACATGATGACGATCGCGCTGGACGCGGTGCTGGGCCTGACCCCCCGCCCCGAG                                                               <  2:1760554/101‑1 (MQ=255)
                                                                                                                                                                                                                  
CGCGAACGTCAACCAAACTTGTAATGTGGTGGTGCAAGCTTGAACTGCCGCCTTACGTTACGCAAAGGGACAAAGGGGGCGGCAGGATGAGTGACGACATGATGACGATC....................................................................................................  >  NC_014034/507732‑507841
....................................................................................................GATGACGATCGCGCTGGACGCGGTGCTGGGCCTGACCCCCCGCCCCGAGGAGGACAGCGCAGCCGACGACAGCCCCCGCGGCCTGCCCGCGGCGCTGATCGACTATCTCG  <  NC_014034/694834‑694735

Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 40 ≤  ATCG