New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 531392 =226 (1.050)2 (0.010) 2/182 36.9 0.01 coding (1111/1440 nt) RCAP_rcc00497 UbiA prenyltransferase
?NC_014034 = 3275712 268 (1.130)coding (13/468 nt) nrdR transcriptional regulator NrdR
Rejected: Position hash score below cutoff.

GATGTCTCGATCTACATGCTGGTCTTCCTGTTTCCGATCTTCCTCAGCCTTGGCTGCGTGAAACGGCTGACCGAACTGACGCTTGCCCCCGACACCGACCCGCTGCCCG....................................................................................................  <  NC_014034/531500‑531392
....................................................................................................CGCTGCCCGTTTTGCGGAAATGTCGATACGCAAGTGAAGGACAGCCGTCCGGCCGAGGATCATGTGGCGATCCGGCGGCGGCGGTTCTGTCCGGCCTGCGGCGGTCGTT  <  NC_014034/3275712‑3275613
                                                                                                                                                                                                                 
                                            CAGCCTTGGCTGCGTGAAACGGCTGACCGAACTGACGCTTGCCCCCGACACCGACCCGCTGCCCGTTTTGCGGAAATGTCGATACGCAAGTGAAGGACAGC                                                                  >  2:2012936/1‑101 (MQ=255)
                                                  TGGCTGCGTGAAACGGCTGACCGAACTGACGCTTGCCCCCGACACCGACCCGCTGCCCGTTTTGCGGAAATGTCGATACGCAAGTGAAGGACAGCCGTCCG                                                            <  1:2013076/101‑1 (MQ=255)
                                                                                                                                                                                                                 
GATGTCTCGATCTACATGCTGGTCTTCCTGTTTCCGATCTTCCTCAGCCTTGGCTGCGTGAAACGGCTGACCGAACTGACGCTTGCCCCCGACACCGACCCGCTGCCCG....................................................................................................  <  NC_014034/531500‑531392
....................................................................................................CGCTGCCCGTTTTGCGGAAATGTCGATACGCAAGTGAAGGACAGCCGTCCGGCCGAGGATCATGTGGCGATCCGGCGGCGGCGGTTCTGTCCGGCCTGCGGCGGTCGTT  <  NC_014034/3275712‑3275613

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 23 ≤  ATCG  < 30 ≤  ATCG  < 39 ≤  ATCG