New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	545184 =	220 (1.000)	2 (0.010)	2/186	37.3	0.01	coding (246/861 nt)	ispE	4‑diphosphocytidyl‑2C‑methyl‑D‑erythritol kinase
	?	NC_014034	2893104 =	200 (0.840)					coding (172/342 nt)	RCAP_rcc02700	lipoprotein
Rejected: Position hash score below cutoff.

CCGAGGGGCTGGGGCTGAAGGTCAGCGGCCCCGAAGGCGCCGCCGTGCCCGAGGGCCCGGAAAATCTGGTGCTGAAGGCGGCGGCGCTGTTTGGCGTGGGCGCGGCG....................................................................................................  <  NC_014034/545290‑545184 ....................................................................................................CGCGGCGCAATATGCCTCGGCGCTGGGGCAGCCCGCGGCGATCATCCCGACGCTGGGCATCACCGATCCGGTCAACGTGATCGAATGGCGGGGCATCGAGCCGCAGG  >  NC_014034/2893104‑2893203                                                                                                                                                                                                                                                          GCCGTGCCCGAGGGCCCGGAAAATCTGGTGCTGAAGGCGGCGGCGCTGTTTGGCGTGGGCGCGGCGCAATATGCCTCGGCGCTGGGGCAGCCCGCGGCGAT                                                                   >  1:2755282/1‑101 (MQ=255)                                            CGTGCCCGAGGGCCCGGAAAATCTGGTGCTGAAGGCGGCGGCGCTGTTTGGCGTGGGCGCGGCGCAATATGCCTCGGCGCTGGGGCAGCCCGCGGCGATCA                                                                 <  2:2755084/101‑1 (MQ=255)                                                                                                                                                                                                                 CCGAGGGGCTGGGGCTGAAGGTCAGCGGCCCCGAAGGCGCCGCCGTGCCCGAGGGCCCGGAAAATCTGGTGCTGAAGGCGGCGGCGCTGTTTGGCGTGGGCGCGGCG....................................................................................................  <  NC_014034/545290‑545184 ....................................................................................................CGCGGCGCAATATGCCTCGGCGCTGGGGCAGCCCGCGGCGATCATCCCGACGCTGGGCATCACCGATCCGGTCAACGTGATCGAATGGCGGGGCATCGAGCCGCAGG  >  NC_014034/2893104‑2893203 Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG