New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 638701 =187 (0.840)2 (0.010) 2/188 37.5 0.01 coding (358/2100 nt) RCAP_rcc00597 hypothetical protein
?NC_014034 = 2456923 192 (0.810)coding (2301/2763 nt) dmsA dimethyl sulfoxide reductase subunit A
Rejected: Position hash score below cutoff.

CGGGGTCGTGCAGCCGCCCGTCCGAGAGCAAGATCACCCCCGCCACCCGCCCGCGCGGCTCGGCCGCCAGCGTCTCGGACAGAACCGCGCCCAGCTGCGTGCCCGC....................................................................................................  <  NC_014034/638806‑638701
....................................................................................................GCCCGCGATGTATCATTCCTGGGGCTCGATGAACGCCTGGCTGCGGCAGATCCTGGGCCATAACGTGCTTTACATTCCGAAATCGGTTTGGCGGGCACAGGGTTTT  <  NC_014034/2456923‑2456824
                                                                                                                                                                                                              
                                                        GGCTCGGCCGCCAGCGTCTCGGACAGAACCGCGCCCAGCTGCGTGCCCGCGATGTATCATTCCTGGGGCTCGATGAACGCCTGGCTGCGGCAGATCCTGGG                                                   >  2:1664669/1‑101 (MQ=255)
                                                                           CGGACAGAACCGCGCCCAGCTGCGTGCCCGCGATGTATCATTCCTGGGGCTCGATGAACGCCTGGCTGCGGCAGATCCTGGGCCATAACGTGCTTTACATT                                <  1:1664780/101‑1 (MQ=255)
                                                                                                                                                                                                              
CGGGGTCGTGCAGCCGCCCGTCCGAGAGCAAGATCACCCCCGCCACCCGCCCGCGCGGCTCGGCCGCCAGCGTCTCGGACAGAACCGCGCCCAGCTGCGTGCCCGC....................................................................................................  <  NC_014034/638806‑638701
....................................................................................................GCCCGCGATGTATCATTCCTGGGGCTCGATGAACGCCTGGCTGCGGCAGATCCTGGGCCATAACGTGCTTTACATTCCGAAATCGGTTTGGCGGGCACAGGGTTTT  <  NC_014034/2456923‑2456824

Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG