New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 682983169 (0.810)2 (0.010) 2/176 36.3 0.01 coding (624/6438 nt) RCAP_rcc00630 ice nucleation protein repeat family protein
?NC_014034 = 1763413 165 (0.690)coding (668/1338 nt) RCAP_rcc01630 M50 family peptidase
Rejected: Position hash score below cutoff.

GGCCAGCGCCGCAGTGCCCAGATGCGCGAAATCGACGGTCTCGAAAGCTGCCAGCTGCTCGGTGCTCAGCGAGGCGAGCTGCGTCGCGGTCAAGGCCGCCGCGGCATCGGCG....................................................................................................  >  NC_014034/682872‑682983
....................................................................................................GCGGCATCGGCGGCCGATTGCGGCAACACCTGCGCGGCGCGCGGCGGCGCCAGCTGCGGCCCGTCAACCACCATGTCGGTGCCGTCGCGCAGCACCCGATAGCTGAGGAAGG  <  NC_014034/1763413‑1763314
                                                                                                                                                                                                                    
                                                TGCCAGCTGCTCGGTGCTCAGCGAGGCGAGCTGCGTCGCGGTCAAGGCCGCCGCGGCATCGGCGGCCGATTGCGGCAACACCTGCGCGGCGCGCGGCGGCG                                                                 >  1:130542/1‑101 (MQ=255)
                                                                      GAGGCGAGCTGCGTCGCGGTCAAGGCCGCCGCGGCATCGGCGGCCGATTGCGGCAACACCTGCGCGGCGCGCGGCGGCGCCAGCTGCGGCCCGTCAACCAC                                           <  2:130528/101‑1 (MQ=255)
                                                                                                                                                                                                                    
GGCCAGCGCCGCAGTGCCCAGATGCGCGAAATCGACGGTCTCGAAAGCTGCCAGCTGCTCGGTGCTCAGCGAGGCGAGCTGCGTCGCGGTCAAGGCCGCCGCGGCATCGGCG....................................................................................................  >  NC_014034/682872‑682983
....................................................................................................GCGGCATCGGCGGCCGATTGCGGCAACACCTGCGCGGCGCGCGGCGGCGCCAGCTGCGGCCCGTCAACCACCATGTCGGTGCCGTCGCGCAGCACCCGATAGCTGAGGAAGG  <  NC_014034/1763413‑1763314

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 25 ≤  ATCG  < 31 ≤  ATCG  < 40 ≤  ATCG