New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	857707 =	192 (0.870)	2 (0.010)	2/186	37.3	0.01	coding (1552/3066 nt)	cheR1	chemotaxis protein methyltransferase CheR
	?	NC_014034	3198856 =	214 (0.900)					coding (557/2208 nt)	cysJ	sulfite reductase (NADPH) flavoprotein subunit alpha
Rejected: Position hash score below cutoff.

TAGGTGCGCGAAAGCGTGGCAAAGCCGCGCTCGACCGCGGTGACGGGGGCATTGTCGGCGCGGGTGCGCGGCGGGCGCGGCGTGACGTAAAGCCCGGCGCGGCGGTC....................................................................................................  <  NC_014034/857813‑857707 ....................................................................................................GGCGGTCATCCACAGCGCGGTGAGGGACGACAGGATCAGCCCGCCCACGGCAAAGCGGGCCAGCTCCACATGCAGCCGCCCGGCAAAGGGGCCACGCGTGCGGCCAA  >  NC_014034/3198856‑3198955                                                                                                                                                                                                                                                     GCGGTGACGGGGGCATTGTCGGCGCGGGTGCGCGGCGGGCGCGGCGTGACGTAAAGCCCGGCGCGGCGGTCATCCACAGCGCGGTGAGGGACGACAGGAcc                                                                        >  1:1118879/1‑99 (MQ=255)                                                              GGGTGCGCGGCGGGCGCGGCGTGACGTAAAGCCCGGCGCGGCGGTCATCCACAGCGCGGTGAGGGACGACAGGATCAGCCCGCCCACGGCAAAGCGGGCCA                                               <  2:1118790/101‑1 (MQ=255)                                                                                                                                                                                                                 TAGGTGCGCGAAAGCGTGGCAAAGCCGCGCTCGACCGCGGTGACGGGGGCATTGTCGGCGCGGGTGCGCGGCGGGCGCGGCGTGACGTAAAGCCCGGCGCGGCGGTC....................................................................................................  <  NC_014034/857813‑857707 ....................................................................................................GGCGGTCATCCACAGCGCGGTGAGGGACGACAGGATCAGCCCGCCCACGGCAAAGCGGGCCAGCTCCACATGCAGCCGCCCGGCAAAGGGGCCACGCGTGCGGCCAA  >  NC_014034/3198856‑3198955 Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 23 ≤  ATCG  < 30 ≤  ATCG  < 38 ≤  ATCG