New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 891124 =136 (0.720)4 (0.020) 2/154 33.6 0.03 intergenic (+81/+152) RCAP_rcc00808/ppx hypothetical protein/exopolyphosphatase
?NC_014034 1473431 = 144 (0.610)intergenic (+138/+81) nadE/RCAP_rcc01367 NAD(+) synthase (glutamine‑hydrolyzing)/hypothetical protein
Rejected: Position hash score below cutoff.

TCGCCTTTCCCCGCCCGCTGCGACCACGGTTCACCGCGACCGTTTCCCCAAGTGCAACAGAGGCCAGCGCCCGACCCGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGCGCTGGCCG....................................................................................................  <  NC_014034/891244‑891124
....................................................................................................GGGCGGGGCGGGCGCTGGCCGAGGGCCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAGGGCAGGGGCCTAGACCCCCAACCGCCGC  >  NC_014034/1473431‑1473530
                                                                                                                                                                                                                             
                         ACGGTTCACCGCGACCGTTTCCCCAAGTGCAACAGAGGCCAGCGCCCGACCCGGCGGGCGGGAAGCGCCCGCCCTGGGCGGGGCGGGCGCTGGCCGGGGGC                                                                                                 >  2:3558493/1‑101 (MQ=255)
                         ACGGTTCACCGCGACCGTTTCCCCAAGTGCAACAGAGGCCAGCGCCCGACCCGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGCGCTGGGCGGGGGC                                                                                                 >  1:379502/1‑101 (MQ=255)
                         ACGGTTCACCGCGACCGTTTCCCCAAGTGCAACAGAGGCCAGCGCCCGACCCGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGCGCTGGGCGAGGGg                                                                                                 >  2:1454992/1‑100 (MQ=255)
                          CGGTTCACCGCGACCGTTTCCCCAAGTGCAACAGAGGCCAGCGCCCGACCCGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGGGCCGGCCGGGGGCt                                                                                                >  1:61843/1‑100 (MQ=255)
                                                                                                                                                                                                                             
TCGCCTTTCCCCGCCCGCTGCGACCACGGTTCACCGCGACCGTTTCCCCAAGTGCAACAGAGGCCAGCGCCCGACCCGGCGGGCGAGAAGCGCCCGCCATGGGCGGGGCGGGCGCTGGCCG....................................................................................................  <  NC_014034/891244‑891124
....................................................................................................GGGCGGGGCGGGCGCTGGCCGAGGGCCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAGGGCAGGGGCCTAGACCCCCAACCGCCGC  >  NC_014034/1473431‑1473530

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 26 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG