New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	91103 =	204 (0.940)	2 (0.010)	2/182	36.9	0.01	coding (555/606 nt)	leuD	3‑isopropylmalate dehydratase small subunit
	?	NC_014034	= 1634091	193 (0.810)					coding (532/2679 nt)	RCAP_rcc01506	signal transduction histidine kinase
Rejected: Position hash score below cutoff.

CCGCCCAGTGGGCGGCCCTTCATCTTGTGCTTCAAGGGGTTGGCGCCACTAACGGGCTCAGACCCAGGGGCGGGCCTGCGCCGATTGCGACTCGAAACTGTCGATGGCG....................................................................................................  <  NC_014034/91211‑91103 ....................................................................................................TCGATGGCGCAGCGCGAACGGGTGTTCACCTCGCTGATGCTGCTCGCCTCGCTGACCACGGCGCTTCTGGCCGCGATCACCGCGGGGCTTGTCATCACCTGGTCGCTCT  <  NC_014034/1634091‑1633992                                                                                                                                                                                                                                                        tGTTGGCGCCACTAACGGGCTCAGACCCAGGGGCGGGCCTGCGCCGATTGCGACTCGAAACTGTCGATGGCGCAGCGCGAACGGGTGTTCACCTCGCTGAT                                                                         <  2:3438341/100‑1 (MQ=255)                                       GTTGGCGCCACTAACGGGCTCGGACCCAGGGGCGGGCCTGCGCCGATTGCGACTCGAAACTGTCGATGGCGCAGCGCGAACGGGGGTTCACCTCGCTGATa                                                                        >  1:3438595/1‑100 (MQ=255)                                                                                                                                                                                                                   CCGCCCAGTGGGCGGCCCTTCATCTTGTGCTTCAAGGGGTTGGCGCCACTAACGGGCTCAGACCCAGGGGCGGGCCTGCGCCGATTGCGACTCGAAACTGTCGATGGCG....................................................................................................  <  NC_014034/91211‑91103 ....................................................................................................TCGATGGCGCAGCGCGAACGGGTGTTCACCTCGCTGATGCTGCTCGCCTCGCTGACCACGGCGCTTCTGGCCGCGATCACCGCGGGGCTTGTCATCACCTGGTCGCTCT  <  NC_014034/1634091‑1633992 Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG