New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 959643237 (1.100)2 (0.010) 2/182 36.9 0.01 coding (25/831 nt) fghA S‑formylglutathione hydrolase
?NC_014034 = 1833145 240 (1.010)coding (367/417 nt) RCAP_rcc01699 hypothetical protein
Rejected: Position hash score below cutoff.

TGGGGCTCGAGCAGATCAACGAGGCCTTCGATCTGATGCATGAAGGCAAGTCGATCCGTTCCGTGATCAAGTTCTGAGGCCGCGATGGAACGTCTTGAAACGCACGGGT....................................................................................................  >  NC_014034/959535‑959643
....................................................................................................CGCACGGGTTTTGGACATGGGACTCTCCTTGACTTTGGGTCAGCCTAACACAGGCCTGCCCCCTCAGATAGAGCCGTTCACCGGCACTGCAAAGCCCCCGCGCGCGCCA  <  NC_014034/1833145‑1833046
                                                                                                                                                                                                                 
                                                                GATCAAGTTCTGAGGCCGCGATGGAACGTCTTGAAACGCACGGGTTTTGGACATGGGACTCTCCTTGACTTTGGGTCAGCCTAACACAGGCCTGCCCCCTC                                              >  1:4456374/1‑101 (MQ=255)
                                                                               CCGCGATGGAACGTCTTGAAACGCACGGGTTTTGGACATGGGACTCTCCTTGACTTTGGGTCAGCCTAACACAGGCCTGCCCCCTCAGATAGAGCCGTTCA                               <  2:4456079/101‑1 (MQ=255)
                                                                                                                                                                                                                 
TGGGGCTCGAGCAGATCAACGAGGCCTTCGATCTGATGCATGAAGGCAAGTCGATCCGTTCCGTGATCAAGTTCTGAGGCCGCGATGGAACGTCTTGAAACGCACGGGT....................................................................................................  >  NC_014034/959535‑959643
....................................................................................................CGCACGGGTTTTGGACATGGGACTCTCCTTGACTTTGGGTCAGCCTAACACAGGCCTGCCCCCTCAGATAGAGCCGTTCACCGGCACTGCAAAGCCCCCGCGCGCGCCA  <  NC_014034/1833145‑1833046

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG