| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_014034 | = 974307 | 2 (0.010) | 9 (0.040) | 2/172 | 35.8 | 0.08 | intergenic (+187/+72) | RCAP_rcc00884/RCAP_rcc00885 | hypothetical protein/hypothetical protein |
| ? | NC_014034 | = 2950684 | 207 (0.870) | intergenic (+27/‑133) | RCAP_rcc02761/RCAP_rcc02762 | glutathione S‑transferase/4Fe‑4S ferredoxin, iron‑sulfur cluster binding protein | |||||
| Rejected: Position hash score below cutoff. | |||||||||||
CCCCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGG.................................................................................................... > NC_014034/974203‑974307
............................................................................................CAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCTTGCTTCAGAAATCAAGTTCCGCATATTGCGGCGAGGGCGGCACCCCGGGCAGCTGATCTGCCAGAAGCGAGCGAAAG < NC_014034/2950684‑2950585
GACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCCGGGG > 2:3814296/1‑101 (MQ=0)
CGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCg < 2:3453023/101‑2 (MQ=0)
CGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGGCCGGGGGgg > 2:3777778/1‑99 (MQ=0)
CGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGGCCGGGGGCg > 2:757891/1‑100 (MQ=0)
GTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGGCAAATATCCCGGGGGTCCGGGGGCgg > 2:981651/1‑99 (MQ=0)
GTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACCAATATCCCGGGGGTCCGGGGGCgg > 2:1350373/1‑99 (MQ=0)
ATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAG > 1:3383763/1‑101 (MQ=0)
ACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCCCCCG > 1:3302467/1‑101 (MQ=0)
ACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCGCTGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGGGTCCGGGGGCGGAGCCCCCG > 2:3365408/1‑101 (MQ=0)
CCCCCGGACCCCCCAGCGTATTTGCACCAAGAAAAAGCAGACGGGCGGGATCCGGCATGGCCG.TGCGCAGCGGCTTGTTTTCACCTTGCGACAAATATCCCGGGG.................................................................................................... > NC_014034/974203‑974307
............................................................................................CAAATATCCCGGGGGTCCGGGGGCAGAGCCCCCGGCTTGCTTCAGAAATCAAGTTCCGCATATTGCGGCGAGGGCGGCACCCCGGGCAGCTGATCTGCCAGAAGCGAGCGAAAG < NC_014034/2950684‑2950585
Base quality scores:
ATCG
< 3 ≤
ATCG
< 10 ≤
ATCG
< 20 ≤
ATCG
< 32 ≤
ATCG
< 41 ≤
ATCG
|