New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	988156 =	216 (0.960)	2 (0.010)	2/190	37.8	0.01	intergenic (+67/‑8)	RCAP_rcc00899/RCAP_rcc00900	nuclease/hypothetical protein
	?	NC_014034	= 1894391	221 (0.930)					coding (686/2655 nt)	alaS	alanyl‑tRNA synthetase
Rejected: Position hash score below cutoff.

CGGCGACATGGCGCAGCACGCGCCTGTCGCGCTCGCTCAGCTCTTCGAAGCTCTTGCGCAAAAGCCGCTCGGAAAGGATGCGAAGCTTGGCGTCCATGGGGCCCC....................................................................................................  <  NC_014034/988260‑988156 ....................................................................................................GCCCCATGCCGGTGTCGATCGACTGCATCTCCAACTCGACCATCGAGCCGTCCTCGAACTGCTCGTTCTGCATGAAGACGTTGTTCCAGATCTCGATGAAGCGGT  <  NC_014034/1894391‑1894292                                                                                                                                                                                                                                                     AGCTCTTCGAAGCTCTTGCGCAAAAGCCGCTCGGAAAGGATGCGAAGCTTGGCGTCCATGGGGCCCCATGCCGGTGTCGATCGACTGCATCTCCAACTCGc                                                                    >  1:847011/1‑100 (MQ=255)                                             TCGAAGCTCTTGCGCAAAAGCCGCTGGGAAAGGATGCGAAGCTTGGCGTCCATGGGGCCCCATGCCGGTGTCGATCGACTGCATCTCCAACTCGACCATCG                                                              <  2:846935/101‑1 (MQ=255)                                                                                                                                                                                                               CGGCGACATGGCGCAGCACGCGCCTGTCGCGCTCGCTCAGCTCTTCGAAGCTCTTGCGCAAAAGCCGCTCGGAAAGGATGCGAAGCTTGGCGTCCATGGGGCCCC....................................................................................................  <  NC_014034/988260‑988156 ....................................................................................................GCCCCATGCCGGTGTCGATCGACTGCATCTCCAACTCGACCATCGAGCCGTCCTCGAACTGCTCGTTCTGCATGAAGACGTTGTTCCAGATCTCGATGAAGCGGT  <  NC_014034/1894391‑1894292 Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 37 ≤  ATCG