New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1224297174 (1.000)95 (0.550) 51/146 6.4 0.52 coding (720/720 nt) hisA 1‑(5‑phosphoribosyl)‑5‑[(5‑ phosphoribosylamino)methylideneamino] imidazole‑4‑carboxamide isomerase
?NC_014034 = 1255865 2 (0.010)intergenic (+35/+207) RCAP_rcc01184/RCAP_rcc01185 CsbD family protein/methyl‑accepting chemotaxis sensory transducer
Rejected: Position hash score below cutoff.

Only 100 of 235 total aligned reads displayed.

CCGCACCCCGGGATATTTGTGGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCGATCACGCCGGTGTCGCGCAGCG  >  NC_014034/1224197‑1224397
                                                                                                      |                                                                                                    
ccGCACCCCGGGATATTTGTGGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGcccccc                                                                                                      >  2:3491499/1‑101 (MQ=255)
  gCACCCCGGGATATTTGTGGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTa                                                                                                    <  1:675791/101‑1 (MQ=255)
  gCACCCCGGGATATTTGTGGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTa                                                                                                    >  1:4597312/1‑101 (MQ=255)
  gCACCCCGGGATATTTGTGGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTa                                                                                                    <  2:210399/101‑1 (MQ=255)
  gCACCCCGGGATATTTGTGGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTa                                                                                                    >  1:440393/1‑101 (MQ=255)
   cACCCCGGGATATTTGTGGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAg                                                                                                   >  2:4364701/1‑101 (MQ=255)
   cACCCCGGGATATTTGTGGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGACCCGCAGGGACGGGGGG..CAGCGCCCCCCTAg                                                                                                   >  1:304281/1‑101 (MQ=255)
    aCCCCGGGATATTTGTGGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAgg                                                                                                  >  2:2899837/1‑101 (MQ=255)
     ccccGGGATATTTGTGGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGc                                                                                                 >  1:3944997/1‑101 (MQ=255)
     ccccGGGATATTTGTGGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGc                                                                                                 >  1:2914699/1‑101 (MQ=255)
      ccgggtatttttGTGGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGcc                                                                                                <  2:841934/92‑1 (MQ=255)
        cGGGATATTTGTGGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTCGGCCtt                                                                                              >  1:990551/1‑101 (MQ=255)
        cGGGATATTTGTGGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCtt                                                                                              >  1:957456/1‑101 (MQ=255)
        cGGGATATTTGTGGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCtt                                                                                              >  2:4498447/1‑101 (MQ=255)
         gggATATTTGTGGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTc                                                                                             <  2:2664260/101‑1 (MQ=255)
         gggATATTTGTGGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTc                                                                                             >  1:566474/1‑101 (MQ=255)
            atatTTGTGGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGGCCCCCTAGGCCTTCAgc                                                                                          >  2:2987979/1‑101 (MQ=255)
             tatTTGTGGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAgcg                                                                                         >  1:1292861/1‑101 (MQ=255)
               tttGTGGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGcgcc                                                                                       <  2:2314414/101‑1 (MQ=255)
                 tgtgGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGcgccgc                                                                                     >  2:4339527/1‑101 (MQ=255)
                     gCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAgc                                                                                 <  1:614339/101‑1 (MQ=255)
                      cAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAgcg                                                                                >  2:3887321/1‑101 (MQ=255)
                      cAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAgcg                                                                                >  2:1674070/1‑101 (MQ=255)
                        aGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGcgcc                                                                              >  2:224353/1‑101 (MQ=255)
                           tGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCt                                                                           >  2:4534546/1‑101 (MQ=255)
                            gAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCtt                                                                          >  1:1249429/1‑101 (MQ=255)
                             aaaCCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTg                                                                         <  1:2139795/101‑1 (MQ=255)
                              aaCCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTga                                                                        >  2:4019160/1‑100 (MQ=255)
                                 cGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..AAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGa                                                                     >  2:914341/1‑101 (MQ=255)
                                  gAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGAGGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGAt                                                                    <  2:475847/101‑1 (MQ=255)
                                   aaGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATc                                                                   >  2:1526421/1‑101 (MQ=255)
                                   aaGCCTCTTCACCTTCCAAAAAATACCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATc                                                                   <  2:3944712/101‑1 (MQ=25)
                                    aGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCa                                                                  >  1:761475/1‑101 (MQ=255)
                                     gCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCaa                                                                 >  1:1716483/1‑101 (MQ=255)
                                       ctctTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAgc                                                               <  2:4390188/101‑1 (MQ=255)
                                       ctctTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAgc                                                               >  1:2545337/1‑101 (MQ=255)
                                        tctTCATCTTGCGACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAgcg                                                              >  1:2527113/1‑101 (MQ=255)
                                         ctTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAgcgc                                                             >  1:2960433/1‑101 (MQ=255)
                                           tCATCTTGCCACAAATCTCCGGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAgcgcgc                                                           <  2:3449322/101‑1 (MQ=255)
                                           tCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAgcgcgc                                                           >  2:653332/1‑101 (MQ=255)
                                            caccTTGCCACAAATGCCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGcc                                                          <  1:198827/98‑1 (MQ=255)
                                             aTCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCg                                                         >  1:236593/1‑101 (MQ=255)
                                               cTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTc                                                       <  2:1915633/101‑1 (MQ=255)
                                               cTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTc                                                       >  1:1118078/1‑101 (MQ=255)
                                                  gCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATa                                                    >  2:2818425/1‑101 (MQ=255)
                                                    cacaAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGa                                                  >  1:3062156/1‑101 (MQ=255)
                                                       aaaTATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTg                                               >  1:4185239/1‑101 (MQ=255)
                                                       aaaTATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTg                                               >  1:1923608/1‑101 (MQ=255)
                                                        aaTATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTgc                                              >  1:529608/1‑101 (MQ=255)
                                                         atatCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTgcc                                             >  1:1856438/1‑101 (MQ=255)
                                                          tatCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTgccc                                            <  1:3773428/101‑1 (MQ=255)
                                                          tatCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTgccc                                            >  1:3687697/1‑101 (MQ=255)
                                                          tatCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTgccc                                            >  1:3468777/1‑101 (MQ=255)
                                                          tatCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTgccc                                            >  1:4275330/1‑101 (MQ=255)
                                                          tatCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTgccc                                            >  2:517772/1‑101 (MQ=255)
                                                          tatCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTgccc                                            >  1:1655734/1‑101 (MQ=255)
                                                           tccccGGGGGAAGCCCCGCGGGGACGGGGGG..CAGCCCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTgcccg                                           <  2:3633740/99‑1 (MQ=38)
                                                           atCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTgcccg                                           >  2:3401571/1‑101 (MQ=255)
                                                            tCCCGGGGGGGGCCCCCCGGGGGCGGGGGGGCCCCCCCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTgccc                                            <  2:2526939/101‑1 (MQ=255)
                                                              ccGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTgcccggcc                                        <  1:3433994/101‑1 (MQ=255)
                                                               cGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTgcccggccc                                       <  2:733778/101‑1 (MQ=255)
                                                                ggggggAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTgcccggcccg                                      <  2:4615014/101‑1 (MQ=255)
                                                                ggggggAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTgcccggcccg                                      >  1:3678513/1‑101 (MQ=255)
                                                                ggggggAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTgcccggcccg                                      <  1:1003046/101‑1 (MQ=255)
                                                                  ggggAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCgag                                    <  2:3215319/101‑1 (MQ=255)
                                                                  ggggAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCgag                                    <  2:1441058/101‑1 (MQ=255)
                                                                   gggAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCgaga                                   >  2:3421915/1‑101 (MQ=255)
                                                                    ggAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGAt                                  <  2:2454770/101‑1 (MQ=255)
                                                                      aGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTg                                >  1:2565928/1‑101 (MQ=255)
                                                                       gTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTgc                               <  2:315084/101‑1 (MQ=255)
                                                                       gTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTgc                               <  2:3048845/101‑1 (MQ=255)
                                                                        tCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTgcg                              >  2:1995390/1‑101 (MQ=255)
                                                                          ccGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGcc                            >  1:2779990/1‑101 (MQ=255)
                                                                           cGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCt                           <  1:1080829/101‑1 (MQ=255)
                                                                            gCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTg                          <  2:2673359/101‑1 (MQ=255)
                                                                            gCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTg                          <  2:2878441/101‑1 (MQ=255)
                                                                            gCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGACCGGCCCGAGATTCCGCCTg                          >  1:2053899/1‑101 (MQ=255)
                                                                             cAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGc                         <  2:1057630/101‑1 (MQ=255)
                                                                             cAGGGACGGGGGG..AAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGc                         <  1:2982261/101‑1 (MQ=255)
                                                                              gggggggggggg..CCGCCCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCg                        <  1:4607713/95‑1 (MQ=255)
                                                                              ggggACGGGGGG..CAGCCCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCg                        <  2:1389480/100‑1 (MQ=255)
                                                                                ggACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCGAt                      <  2:4590061/101‑1 (MQ=255)
                                                                                  aCGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCGATCa                    <  1:706859/101‑1 (MQ=255)
                                                                                   cGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCGATCAc                   >  2:966042/1‑101 (MQ=255)
                                                                                   cGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCGATCAc                   <  2:1246366/101‑1 (MQ=255)
                                                                                   cGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCGATCAc                   >  2:149267/1‑101 (MQ=255)
                                                                                   cGGGGCG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCGATCAc                   <  2:1873858/101‑1 (MQ=255)
                                                                                      gggg..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCGATCACGcc                <  1:1526530/101‑1 (MQ=255)
                                                                                       ggg..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCGATCACGCCg               <  1:4364993/101‑1 (MQ=255)
                                                                                        gg..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCGATCACGCCgg              >  1:4036232/1‑101 (MQ=255)
                                                                                            cAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCACGGCCCGAGATTGCGCCTGCGATCACGCCgggg            >  1:3979957/1‑99 (MQ=255)
                                                                                             aGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCGATCACGCCGgtgt           <  1:3104502/101‑1 (MQ=255)
                                                                                               cgcCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCGATCACGCCGGTGTcg         >  1:2684887/1‑101 (MQ=255)
                                                                                               ccccncccTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCGATCACGCCGGTGTcg         <  1:4534841/99‑1 (MQ=255)
                                                                                                gcCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCGATCACGCCGGTGTcgc        <  2:1812594/101‑1 (MQ=255)
                                                                                                   ccccTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCGATCACGCCGGTGTCGCGCa     <  1:3884826/101‑1 (MQ=255)
                                                                                                   ccccTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCGATCACGCCGGTGTCGCGCa     >  2:1315514/1‑101 (MQ=255)
                                                                                                   ccccTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCGATCACGCCGGTGTCGCGCa     <  1:229140/101‑1 (MQ=255)
                                                                                                   ccccTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCGATCACGCCGGTGTCGCGCa     <  2:2228552/101‑1 (MQ=255)
                                                                                                      cTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCGATCACGCCGGTGTCGCGCAgcg  <  1:3492767/101‑1 (MQ=255)
                                                                                                      |                                                                                                    
CCGCACCCCGGGATATTTGTGGCAAGATGAAACCGAAGCCTCTTCATCTTGCCACAAATATCCCGGGGGGAGTCCCGCAGGGACGGGGGG..CAGCGCCCCCCTAGGCCTTCAGCGCCGCAAGCGCCGCTTGCAGATCAAGCGCGCCGTCATAGATTGCCCGGCCCGAGATTGCGCCTGCGATCACGCCGGTGTCGCGCAGCG  >  NC_014034/1224197‑1224397

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 34 ≤  ATCG  < 40 ≤  ATCG